protocadherin gamma subfamily B, 5

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Synonym

protocadherin gamma subfamily B, 5, PCDH-gamma-B5, PCDH-GAMMA-B5, PCDHGB5, Protocadherin gamma B5 precursor

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST nodata
GeneChip cerebrum:9.77 cerebellum:9.62 brain stem:9.29 corpus callosum/glia:10.01 pineal gland:- peripheral nerve:9.15 spine:10.44 retina:- eye:- artery/aorta:9.02 vein:8.90 lymphnode:7.93 peripheral blood:- spleen:7.97 thymus:7.21 bone marrow:7.41 adipose:8.92 bone:- skin:8.42
CAGE cerebrum:0.51 cerebellum:- brain stem:0.35 corpus callosum/glia:0.70 pineal gland:1.12 peripheral nerve:- spine:0.74 retina:- eye:- artery/aorta:0.34 vein:0.18 lymphnode:0.49 peripheral blood:- spleen:0.25 thymus:0.28 bone marrow:- adipose:0.63 bone:- skin:-
RNA-seq cerebrum:0.87 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.48 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:1.51 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST nodata
GeneChip uterus:8.91 placenta:7.82 prostate:8.30 ovary:8.61 testis:8.29 heart:8.53 muscle:7.02 esophagus:8.37 stomach:8.29 intestine:8.11 colon:8.27 liver/hepato:7.79 lung:9.07 bladder:- kidney:8.02 pituitary:9.45 thyroid/parathyroid:8.54 adrenal gland:9 pancreas:7.77 breast:8.97 salivary:8.20
CAGE uterus:0.43 placenta:0.48 prostate:0.21 ovary:0.56 testis:0.31 heart:0.30 muscle:0.34 esophagus:0.40 stomach:- intestine:0 colon:0.12     liver/hepato:0.71    lung:0.27 bladder:0.58 kidney:0.49 pituitary:0.32 thyroid/parathyroid:0.76 adrenal gland:- pancreas:0 breast:0.90 salivary:0
RNA-seq uterus:- placenta:- prostate:1.67 ovary:2.02 testis:1.81 heart:0.94 muscle:0.71 esophagus:- stomach:- intestine:- colon:1.07     liver/hepato:0.75        lung:1.62    bladder:- kidney:1.20 pituitary:- thyroid/parathyroid:2.25 adrenal gland:1.33 pancreas:- breast:1.20 salivary:-

Gene Information

IDs

Refseq ID NM_018925
Gene ID 56101
Unigene ID -
Probe set ID 205717_x_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000253953
GTEx ID ENSG00000253953

Orthologous Gene

Mouse [0]  
Rat [0]  

Chromosomal Region

-

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

10380929
10716726
10817752
10835267
11230163
12477932
19199708

Gene Ontology  (GO ID)

Biological Process

GO:0007156  homophilic cell adhesion

Cellular Component

GO:0016021  integral to membrane
GO:0005886  plasma membrane

Molecular Function

GO:0005509  calcium ion binding