T-box 20

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Synonym

TBX20, T-box transcription factor TBX20, T-box protein 20, T-box 20

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:- cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
GeneChip nodata
CAGE cerebrum:0.02 cerebellum:- brain stem:0 corpus callosum/glia:0 pineal gland:0 peripheral nerve:- spine:0.13 retina:- eye:- artery/aorta:1.48 vein:0.96 lymphnode:0.41 peripheral blood:- spleen:0.25 thymus:0 bone marrow:- adipose:0.14 bone:- skin:-
RNA-seq cerebrum:0 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.00 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip nodata
CAGE uterus:0.07 placenta:3.60 prostate:4.20 ovary:0.07 testis:0.81 heart:5.04 muscle:0 esophagus:0.09 stomach:- intestine:0.14 colon:0     liver/hepato:1.07    lung:0.10 bladder:4.42 kidney:0 pituitary:2.04 thyroid/parathyroid:0 adrenal gland:- pancreas:0 breast:0 salivary:0
RNA-seq uterus:- placenta:- prostate:0.00 ovary:0 testis:0.00 heart:0.00 muscle:0 esophagus:- stomach:- intestine:- colon:0     liver/hepato:0.06        lung:0.02    bladder:- kidney:0 pituitary:- thyroid/parathyroid:0.02 adrenal gland:0 pancreas:- breast:0 salivary:-

Gene Information

IDs

Refseq ID NM_001166220
Gene ID 57057
Unigene ID Hs.404167
Probe set ID -
Ensembl ID ENSG00000164532
GTEx ID ENSG00000164532

Orthologous Gene

Mouse[6]  NM_001205085, NM_020496, NM_194263
Rat [0]  

Chromosomal Region

7p14.2  [35,242,042  -  35,293,758]

Gene Family (Interpro ID)

IPR001699  Transcription factor, T-box

Link to Pubmed  (Pubmed ID)

9847074
10936053
12477932
12690205
12853948
14550786
15489334
17668378
18275040
18834961
19414016
19762328
20200978
20211142
21586270
21963094
22465533
23871353

Gene Ontology  (GO ID)

Biological Process

GO:0003180  aortic valve morphogenesis
GO:0060413  atrial septum morphogenesis
GO:0008015  blood circulation
GO:0003207  cardiac chamber formation
GO:0055008  cardiac muscle tissue morphogenesis
GO:0003215  cardiac right ventricle morphogenesis
GO:0003279  cardiac septum development
GO:0008283  cell proliferation
GO:0009953  dorsal/ventral pattern formation
GO:0003143  embryonic heart tube morphogenesis
GO:0003272  endocardial cushion formation
GO:0003203  endocardial cushion morphogenesis
GO:0001706  endoderm formation
GO:0001947  heart looping
GO:0048370  lateral mesoderm formation
GO:0006936  muscle contraction
GO:0010991  negative regulation of SMAD protein complex assembly
GO:0000122  negative regulation of transcription from RNA polymerase II promoter
GO:0045892  negative regulation of transcription, DNA-dependent
GO:0001764  neuron migration
GO:0003148  outflow tract septum morphogenesis
GO:0001569  patterning of blood vessels
GO:0003344  pericardium morphogenesis
GO:0060045  positive regulation of cardiac muscle cell proliferation
GO:0003193  pulmonary valve formation
GO:0060577  pulmonary vein morphogenesis
GO:0003175  tricuspid valve development
GO:0021524  visceral motor neuron differentiation

Cellular Component

GO:0005737  cytoplasm
GO:0005634  nucleus

Molecular Function

GO:0003700  transcription factor activity