prostaglandin D2 synthase 21kDa (brain)

Synonym

Prostaglandin-H2 D-isomerase precursor, Lipocalin-type prostaglandin-D synthase, Cerebrin-28, PGD2, Beta-trace protein, PTGDS, Glutathione-independent PGD synthetase, PGDS2, prostaglandin D2 synthase 21kDa (brain), Prostaglandin-D2 synthase, PDS, PGD2 synthase

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:405.30

cerebellum:25.20

brain stem:-

corpus callosum/glia:233.30

pineal gland:1186.80

peripheral nerve:184

spine:1123

retina:711.80

eye:1292.90

artery/aorta:-

vein:-

lymphnode:-

peripheral blood:218.60

spleen:75.60

thymus:-

bone marrow:59

adipose:80.70

bone:76.80

skin:153.60

GeneChip

cerebrum:12.19

cerebellum:11.14

brain stem:12.31

corpus callosum/glia:12.70

pineal gland:-

peripheral nerve:12.98

spine:12.82

retina:-

eye:-

artery/aorta:10.06

vein:11.27

lymphnode:10.73

peripheral blood:-

spleen:10.16

thymus:9.27

bone marrow:7.40

adipose:9.49

bone:-

skin:8.52

CAGE

cerebrum:8.03

cerebellum:-

brain stem:8.41

corpus callosum/glia:8.85

pineal gland:6.78

peripheral nerve:-

spine:8.48

retina:-

eye:-

artery/aorta:5.33

vein:6.89

lymphnode:6.78

peripheral blood:-

spleen:6.03

thymus:4.84

bone marrow:-

adipose:4.02

bone:-

skin:-

RNA-seq

cerebrum:8.63

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:6.70

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:3.50

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:18.20

placenta:72.90

prostate:180.20

ovary:37.30

testis:311.50

heart:344.80

muscle:60.30

esophagus:-

stomach:-

intestine:32.40

colon:33.90

liver/hepato:-

lung:73.30

bladder:-

kidney:31.20

pituitary:116

thyroid/parathyroid:-

adrenal gland:-

pancreas:80

breast:74.30

salivary:-

GeneChip

uterus:10.41

placenta:9

prostate:10.65

ovary:9.22

testis:13.10

heart:11.64

muscle:8.20

esophagus:8.44

stomach:9.03

intestine:8.53

colon:9.08

liver/hepato:7.48

lung:10.35

bladder:-

kidney:9

pituitary:8.67

thyroid/parathyroid:7.83

adrenal gland:9

pancreas:7.65

breast:9.31

salivary:7.73

CAGE

uterus:7.42

placenta:6.37

prostate:7.99

ovary:5.63

testis:8.89

heart:8.07

muscle:4.00

esophagus:5.35

stomach:-

intestine:3.78

colon:4.85

liver/hepato:4.24

lung:6.54

bladder:5.84

kidney:5.70

pituitary:5.55

thyroid/parathyroid:4.11

adrenal gland:-

pancreas:4.01

breast:4.10

salivary:5.05

RNA-seq

uterus:-

placenta:-

prostate:6.13

ovary:5.08

testis:11.32

heart:9.27

muscle:3.44

esophagus:-

stomach:-

intestine:-

colon:5.62

liver/hepato:2.53

lung:8.41

bladder:-

kidney:5.57

pituitary:-

thyroid/parathyroid:4.07

adrenal gland:6.84

pancreas:-

breast:4.97

salivary:-

IDs

Refseq ID	NM_000954
Gene ID	5730
Unigene ID	Hs.446429
Probe set ID	211748_x_at [HG-U133_Plus_2]
Ensembl ID	ENSG00000107317
GTEx ID	ENSG00000107317

Orthologous Gene

Mouse[2]	NM_008963
Rat [0]

Chromosomal Region

9q34.3 [139,871,956 - 139,879,887]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

IPR002968	Alpha-1-microglobulin
IPR012674	Calycin
IPR011038	Calycin-like
IPR002345	Lipocalin
IPR000566	Lipocalin/cytosolic fatty-acid binding protein
IPR002971	Mus/Rat 1 allergen
IPR003087	Neutrophil gelatinase-associated lipocalin
IPR002972	Prostaglandin D synthase

GO:0019369	arachidonic acid metabolic process
GO:0019371	cyclooxygenase pathway
GO:0001516	prostaglandin biosynthetic process
GO:0045187	regulation of circadian sleep/wake cycle, sleep
GO:0051384	response to glucocorticoid stimulus
GO:0006810	transport

GO:0005789	endoplasmic reticulum membrane
GO:0005576	extracellular region
GO:0005615	extracellular space
GO:0005794	Golgi apparatus
GO:0031965	nuclear membrane
GO:0048471	perinuclear region of cytoplasm
GO:0005791	rough endoplasmic reticulum

GO:0005504	fatty acid binding
GO:0004667	prostaglandin-D synthase activity
GO:0005501	retinoid binding
GO:0005215	transporter activity

prostaglandin D2 synthase 21kDa (brain)

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function