leucine rich repeat containing 47

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Synonym

RP1-286D6.3, Leucine-rich repeat-containing protein 47, LRRC47, KIAA1185, leucine rich repeat containing 47

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:7.10 cerebellum:12.60 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:29.40 artery/aorta:- vein:- lymphnode:10.10 peripheral blood:18.20 spleen:- thymus:- bone marrow:- adipose:- bone:- skin:9.60
GeneChip cerebrum:8.40 cerebellum:8.57 brain stem:8.23 corpus callosum/glia:8.18 pineal gland:- peripheral nerve:8.13 spine:8.18 retina:- eye:- artery/aorta:8.22 vein:7.76 lymphnode:8.07 peripheral blood:- spleen:8.17 thymus:8.49 bone marrow:7.34 adipose:8.10 bone:- skin:8.39
CAGE cerebrum:3.67 cerebellum:- brain stem:3.62 corpus callosum/glia:3.77 pineal gland:3.35 peripheral nerve:- spine:3.21 retina:- eye:- artery/aorta:3.38 vein:3.68 lymphnode:3.15 peripheral blood:- spleen:3.35 thymus:3.71 bone marrow:- adipose:3.70 bone:- skin:-
RNA-seq cerebrum:4.29 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:3.77 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:4.20 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:18.20 placenta:25.50 prostate:22.50 ovary:- testis:4.30 heart:51.10 muscle:20.10 esophagus:- stomach:- intestine:- colon:8.50     liver/hepato:10.60        lung:4.90    bladder:- kidney:10.40 pituitary:- thyroid/parathyroid:- adrenal gland:50.80 pancreas:26.70 breast:9.30 salivary:-
GeneChip uterus:8.30 placenta:8.18 prostate:8.55 ovary:8.39 testis:7.91 heart:8.12 muscle:9.48 esophagus:8.58 stomach:8.11 intestine:8.14 colon:7.88 liver/hepato:8.20 lung:7.88 bladder:- kidney:8.12 pituitary:8.33 thyroid/parathyroid:8.62 adrenal gland:8.11 pancreas:7.93 breast:8.55 salivary:8.35
CAGE uterus:3.69 placenta:3.69 prostate:3.68 ovary:3.96 testis:3.36 heart:3.72 muscle:4.25 esophagus:3.71 stomach:- intestine:3.45 colon:3.51     liver/hepato:3.93    lung:3.39 bladder:3.66 kidney:3.40 pituitary:3.25 thyroid/parathyroid:3.82 adrenal gland:- pancreas:3.82 breast:3.27 salivary:3.74
RNA-seq uterus:- placenta:- prostate:4.28 ovary:4.95 testis:4.22 heart:3.78 muscle:5.39 esophagus:- stomach:- intestine:- colon:3.81     liver/hepato:3.78        lung:3.02    bladder:- kidney:4.09 pituitary:- thyroid/parathyroid:4.80 adrenal gland:4.28 pancreas:- breast:4.27 salivary:-

Gene Information

IDs

Refseq ID NM_020710
Gene ID 57470
Unigene ID Hs.268488
Probe set ID 212904_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000130764
GTEx ID ENSG00000130764

Orthologous Gene

Mouse[2]  NM_201226
Rat[1]  NM_001135666

Chromosomal Region

1p36.32  [3,696,784  -  3,713,068]

Gene Family (Interpro ID)

IPR005146  B3/B4 tRNA-binding domain

Link to Pubmed  (Pubmed ID)

10574461
12477932
15489334
16710414
17081983
19322201
19615732
21139048
21145461
22190034
22268729
22586326
22589738
22863883
22939629
23463506
23720494
24816145

Gene Ontology  (GO ID)

Molecular Function

GO:0004826  phenylalanine-tRNA ligase activity
GO:0005515  protein binding
GO:0003723  RNA binding