RAB5A, member RAS oncogene family

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Synonym

Ras-related protein Rab-5A, RAB5A, RAB5, RAB5A, member RAS oncogene family

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:113.80

cerebellum:75.60

brain stem:-

corpus callosum/glia:58.30

pineal gland:-

peripheral nerve:92

spine:224.60

retina:118.60

eye:47

artery/aorta:329.70

vein:-

lymphnode:50.60

peripheral blood:200.40

spleen:94.50

thymus:64.40

bone marrow:78.70

adipose:161.30

bone:64

skin:86.40

GeneChip

cerebrum:8.71

cerebellum:8.68

brain stem:8.91

corpus callosum/glia:8.89

pineal gland:-

peripheral nerve:8.54

spine:9.09

retina:-

eye:-

artery/aorta:8.05

vein:8.44

lymphnode:8.02

peripheral blood:-

spleen:8.02

thymus:8.17

bone marrow:7.75

adipose:8.31

bone:-

skin:8.72

CAGE

cerebrum:4.45

cerebellum:-

brain stem:4.55

corpus callosum/glia:4.34

pineal gland:4.76

peripheral nerve:-

spine:4.70

retina:-

eye:-

artery/aorta:3.93

vein:3.66

lymphnode:3.86

peripheral blood:-

spleen:3.88

thymus:4.01

bone marrow:-

adipose:3.94

bone:-

skin:-

RNA-seq

cerebrum:5.55

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:4.39

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:4.89

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:118.50

placenta:109.30

prostate:78.90

ovary:-

testis:121.10

heart:63.90

muscle:20.10

esophagus:-

stomach:21.20

intestine:-

colon:59.40

liver/hepato:84.40

lung:97.80

bladder:-

kidney:83.20

pituitary:-

thyroid/parathyroid:-

adrenal gland:101.60

pancreas:80

breast:27.90

salivary:-

GeneChip

uterus:8.39

placenta:9.11

prostate:8.88

ovary:8.38

testis:7.95

heart:8.25

muscle:7.86

esophagus:8.59

stomach:8.20

intestine:8.06

colon:7.88

liver/hepato:7.90

lung:8.68

bladder:-

kidney:7.88

pituitary:8.19

thyroid/parathyroid:8.59

adrenal gland:8.17

pancreas:7.57

breast:8.34

salivary:8.41

CAGE

uterus:3.99

placenta:4.49

prostate:3.92

ovary:3.86

testis:3.90

heart:4.27

muscle:4.38

esophagus:4.14

stomach:-

intestine:4.12

colon:3.41

liver/hepato:4.14

lung:4.11

bladder:4.24

kidney:4.02

pituitary:4.22

thyroid/parathyroid:3.97

adrenal gland:-

pancreas:4.06

breast:3.49

salivary:3.96

RNA-seq

uterus:-

placenta:-

prostate:5.02

ovary:4.64

testis:4.63

heart:4.36

muscle:3.89

esophagus:-

stomach:-

intestine:-

colon:4.80

liver/hepato:4.19

lung:5.35

bladder:-

kidney:4.81

pituitary:-

thyroid/parathyroid:5.23

adrenal gland:4.68

pancreas:-

breast:5.00

salivary:-

IDs

Refseq ID	NM_004162
Gene ID	5868
Unigene ID	Hs.475663
Probe set ID	209089_at [HG-U133_Plus_2]
Ensembl ID	ENSG00000144566
GTEx ID	ENSG00000144566

Orthologous Gene

Mouse[1]	NM_025887
Rat [0]

Chromosomal Region

3p24.3 [19,988,571 - 20,026,667]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

IPR002041	Ran GTPase
IPR013753	Ras
IPR001806	Ras GTPase
IPR020849	Ras small GTPase
IPR003579	Ras small GTPase, Rab type
IPR005225	Small GTP-binding protein
IPR020851	Small GTPase
IPR003578	Small GTPase, Rho type

GO:0007596	blood coagulation
GO:0030154	cell differentiation
GO:0006897	endocytosis
GO:0006184	GTP catabolic process
GO:0007399	nervous system development
GO:0045921	positive regulation of exocytosis
GO:0015031	protein transport
GO:0051489	regulation of filopodium assembly
GO:0007264	small GTPase mediated signal transduction

GO:0015629	actin cytoskeleton
GO:0005769	early endosome
GO:0031901	early endosome membrane
GO:0030139	endocytic vesicle
GO:0010008	endosome membrane
GO:0042470	melanosome
GO:0045121	membrane raft
GO:0005886	plasma membrane
GO:0001726	ruffle

GO:0019003	GDP binding
GO:0005525	GTP binding
GO:0003924	GTPase activity
GO:0005515	protein binding

RAB5A, member RAS oncogene family

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function