PR domain containing 13

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Synonym

PRDM13, PR domain zinc finger protein 13, PR domain containing 13, PFM10, MU-MB-20.220, PR domain-containing protein 13

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:- cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
GeneChip cerebrum:3.22 cerebellum:3.24 brain stem:3.22 corpus callosum/glia:3.18 pineal gland:- peripheral nerve:3.15 spine:3.46 retina:- eye:- artery/aorta:3.17 vein:3.08 lymphnode:3.05 peripheral blood:- spleen:3.06 thymus:3.05 bone marrow:3.21 adipose:3.14 bone:- skin:3.13
CAGE cerebrum:0 cerebellum:- brain stem:0 corpus callosum/glia:0 pineal gland:0 peripheral nerve:- spine:0 retina:- eye:- artery/aorta:0 vein:0 lymphnode:0 peripheral blood:- spleen:0 thymus:0 bone marrow:- adipose:0 bone:- skin:-
RNA-seq cerebrum:0 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.01 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip uterus:3.02 placenta:3.06 prostate:3.01 ovary:3.02 testis:3.13 heart:3.15 muscle:3.27 esophagus:2.99 stomach:3.09 intestine:3.06 colon:3.21 liver/hepato:3.12 lung:2.93 bladder:- kidney:3.04 pituitary:3.15 thyroid/parathyroid:3.01 adrenal gland:3.04 pancreas:3.16 breast:3.01 salivary:3.11
CAGE uterus:0.04 placenta:0 prostate:0 ovary:0 testis:0.16 heart:0 muscle:0 esophagus:0 stomach:- intestine:0 colon:0     liver/hepato:0    lung:0 bladder:0 kidney:0 pituitary:0 thyroid/parathyroid:0 adrenal gland:- pancreas:0 breast:0 salivary:0
RNA-seq uterus:- placenta:- prostate:0 ovary:0 testis:0.26 heart:0 muscle:0 esophagus:- stomach:- intestine:- colon:0     liver/hepato:0.00        lung:0    bladder:- kidney:0 pituitary:- thyroid/parathyroid:0 adrenal gland:0 pancreas:- breast:0 salivary:-

Gene Information

IDs

Refseq ID NM_021620
Gene ID 59336
Unigene ID Hs.287386
Probe set ID 221168_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000112238
GTEx ID ENSG00000112238

Orthologous Gene

Mouse[1]  NM_001080771
Rat[1]  NM_001080771

Chromosomal Region

6q16.2  [100,054,606  -  100,063,454]

Gene Family (Interpro ID)

IPR015880  Zinc finger, C2H2-like
IPR007087  Zinc finger, C2H2-type

Link to Pubmed  (Pubmed ID)

11181995
12800201
14574404
19336002
21102462

Gene Ontology  (GO ID)

Biological Process

GO:0022008  neurogenesis
GO:0006355  regulation of transcription, DNA-dependent
GO:0006351  transcription, DNA-dependent

Cellular Component

GO:0005634  nucleus

Molecular Function

GO:0003677  DNA binding
GO:0046872  metal ion binding
GO:0008168  methyltransferase activity