bromodomain containing 2

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Synonym

O27.1.1, bromodomain containing 2, FLJ31942, BRD2, RNF3, Protein RING3, NAT, D6S113E, Bromodomain-containing protein 2, FSRG1, KIAA9001, RING3, bromodomain-containing 2, DKFZp686N0336

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:207.40 cerebellum:239.30 brain stem:- corpus callosum/glia:612.40 pineal gland:148.30 peripheral nerve:122.70 spine:449.20 retina:118.60 eye:94 artery/aorta:389.70 vein:599.80 lymphnode:232.50 peripheral blood:309.70 spleen:680.60 thymus:644.20 bone marrow:19.70 adipose:40.30 bone:307.10 skin:206.40
GeneChip cerebrum:8.65 cerebellum:8.85 brain stem:8.47 corpus callosum/glia:8.91 pineal gland:- peripheral nerve:9.38 spine:8.79 retina:- eye:- artery/aorta:9.41 vein:8.77 lymphnode:9.66 peripheral blood:- spleen:10 thymus:9.50 bone marrow:8.77 adipose:8.98 bone:- skin:8.80
CAGE cerebrum:4.22 cerebellum:- brain stem:4.33 corpus callosum/glia:4.43 pineal gland:4.14 peripheral nerve:- spine:4.32 retina:- eye:- artery/aorta:4.63 vein:4.57 lymphnode:4.33 peripheral blood:- spleen:4.27 thymus:4.46 bone marrow:- adipose:4.23 bone:- skin:-
RNA-seq cerebrum:0 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:373.60 placenta:131.10 prostate:112.60 ovary:111.80 testis:462.90 heart:114.90 muscle:- esophagus:- stomach:658.50 intestine:291.60 colon:245.90     liver/hepato:221.70        lung:342.10    bladder:628.10 kidney:156 pituitary:116 thyroid/parathyroid:327.50 adrenal gland:203.10 pancreas:124.50 breast:195.20 salivary:-
GeneChip uterus:9.10 placenta:8.88 prostate:9.35 ovary:9.29 testis:10.09 heart:8.54 muscle:7.93 esophagus:9.15 stomach:9.48 intestine:8.47 colon:8.96 liver/hepato:9.37 lung:9.58 bladder:- kidney:9.26 pituitary:9.51 thyroid/parathyroid:10 adrenal gland:9.67 pancreas:8.30 breast:9.15 salivary:9.23
CAGE uterus:4.53 placenta:4.21 prostate:4.40 ovary:4.39 testis:5.14 heart:3.99 muscle:3.79 esophagus:4.20 stomach:- intestine:3.99 colon:4.17     liver/hepato:4.13    lung:4.50 bladder:4.29 kidney:4.18 pituitary:4.32 thyroid/parathyroid:4.46 adrenal gland:- pancreas:4.61 breast:4.26 salivary:4.45
RNA-seq uterus:- placenta:- prostate:0 ovary:0 testis:0 heart:0 muscle:0 esophagus:- stomach:- intestine:- colon:0     liver/hepato:0        lung:0    bladder:- kidney:0 pituitary:- thyroid/parathyroid:0 adrenal gland:0 pancreas:- breast:0 salivary:-

Gene Information

IDs

Refseq ID NM_005104
Gene ID 6046
Unigene ID Hs.75243
Probe set ID 208685_x_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000204256
GTEx ID ENSG00000204256

Orthologous Gene

Mouse[2]  NM_001204973, NM_010238
Rat [0]  

Chromosomal Region

6p21.32  [32,936,437  -  32,949,282]
HSCHR6_MHC_COX  [32,858,771  -  32,871,622]
HSCHR6_MHC_SSTO  [33,026,347  -  33,089,202]
HSCHR6_MHC_QBL  [32,865,184  -  32,878,022]
HSCHR6_MHC_MCF  [32,969,905  -  32,980,956]
HSCHR6_MHC_DBB  [32,923,568  -  32,927,227]
HSCHR6_MHC_MANN  [33,090,267  -  33,103,106]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

1350857
1352711
1663500
8595877
8781126
9373153
9693039
10934046
10965846
11502199
11983150
12145330
12366783
12477932
12600283
12830434
14563639
14574404
14702039
14731392
15146197
15302935
15342556
15489334
15548137
15949438
16344560
16512664
16516380
16786191
16940503
17081983
17111193
17148447
17166848
17848202
17999746
18406326
19204726
19322201
19454010
19766566
19851445
19953286
20036832
20048151
20587610
20709061
20811636
21139048
21608014
22035730
22766109
23115324
23255218
23455922
23756480
24048450
24049186
24146614
24250222
24733848

Gene Ontology  (GO ID)

Biological Process

GO:0016568  chromatin modification
GO:0006334  nucleosome assembly
GO:0006357  regulation of transcription from RNA polymerase II promoter
GO:0007283  spermatogenesis
GO:0006351  transcription, DNA-dependent

Cellular Component

GO:0005737  cytoplasm
GO:0005634  nucleus

Molecular Function

GO:0003682  chromatin binding
GO:0070577  histone acetyl-lysine binding