chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated)

Synonym

member 18, Pulmonary and activation-regulated chemokine, Dendritic cell chemokine 1, SCYA18, AMAC-1, MIP4, Small inducible cytokine A18 precursor, CKb7, MIP-4, DCCK1, Macrophage inflammatory protein 4, AMAC1, DC-CK1, CC chemokine PARC, CCL18

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:-

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:119.90

vein:-

lymphnode:-

peripheral blood:18.20

spleen:-

thymus:-

bone marrow:-

adipose:-

bone:102.40

skin:9.60

GeneChip

cerebrum:5.62

cerebellum:5.49

brain stem:5.65

corpus callosum/glia:5.51

pineal gland:-

peripheral nerve:5.47

spine:5.55

retina:-

eye:-

artery/aorta:6.12

vein:5.69

lymphnode:7.03

peripheral blood:-

spleen:5.76

thymus:7.66

bone marrow:6.35

adipose:6.05

bone:-

skin:6.39

CAGE

cerebrum:0.03

cerebellum:-

brain stem:0.07

corpus callosum/glia:0.24

pineal gland:0

peripheral nerve:-

spine:0.32

retina:-

eye:-

artery/aorta:3.56

vein:3.18

lymphnode:4.91

peripheral blood:-

spleen:2.90

thymus:5.04

bone marrow:-

adipose:2.17

bone:-

skin:-

RNA-seq

cerebrum:0.02

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:6.64

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:4.20

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:18.20

placenta:10.90

prostate:-

ovary:-

testis:4.30

heart:-

muscle:-

esophagus:-

stomach:-

intestine:-

colon:25.40

liver/hepato:-

lung:83.10

bladder:-

kidney:-

pituitary:-

thyroid/parathyroid:-

adrenal gland:-

pancreas:240.10

breast:9.30

salivary:-

GeneChip

uterus:5.48

placenta:5.57

prostate:5.39

ovary:5.60

testis:5.69

heart:6.41

muscle:5.88

esophagus:6.27

stomach:5.95

intestine:6.70

colon:6.15

liver/hepato:5.76

lung:8.12

bladder:-

kidney:5.61

pituitary:5.72

thyroid/parathyroid:5.66

adrenal gland:5.74

pancreas:6.34

breast:5.72

salivary:5.80

CAGE

uterus:0.31

placenta:3.23

prostate:1.42

ovary:2.88

testis:1.63

heart:3.53

muscle:0.57

esophagus:2.77

stomach:-

intestine:2.81

colon:2.65

liver/hepato:0.55

lung:4.89

bladder:3.47

kidney:0.62

pituitary:0

thyroid/parathyroid:2.44

adrenal gland:-

pancreas:1.21

breast:0.55

salivary:1.49

RNA-seq

uterus:-

placenta:-

prostate:2.53

ovary:4.40

testis:0.75

heart:4.20

muscle:0.32

esophagus:-

stomach:-

intestine:-

colon:2.91

liver/hepato:1.63

lung:5.82

bladder:-

kidney:0

pituitary:-

thyroid/parathyroid:1.48

adrenal gland:6.71

pancreas:-

breast:4.38

salivary:-

IDs

Refseq ID	NM_002988
Gene ID	6362
Unigene ID	Hs.143961
Probe set ID	209924_at [HG-U133_Plus_2]
Ensembl ID	ENSG00000006074
GTEx ID	ENSG00000006074

Orthologous Gene

Mouse[1]	NM_011337
Rat [0]

Chromosomal Region

17q12 [34,391,640 - 34,399,392]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

IPR001089	Small chemokine, C-X-C
IPR002473	Small chemokine, C-X-C/Interleukin 8
IPR001811	Small chemokine, interleukin-8-like

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

GO:0007154	cell communication
GO:0007267	cell-cell signaling
GO:0006935	chemotaxis
GO:0006955	immune response
GO:0006954	inflammatory response
GO:0009607	response to biotic stimulus
GO:0007165	signal transduction

Cellular Component

GO:0005615

extracellular space

Molecular Function

GO:0008009	chemokine activity
GO:0005515	protein binding

chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated)

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function