stimulated by retinoic acid gene 6 homolog (mouse)

 jump to detail

Synonym

STRA6, stimulated by retinoic acid gene 6 homolog (mouse), PP14296, FLJ12541

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:8.30 cerebellum:- brain stem:- corpus callosum/glia:29.20 pineal gland:- peripheral nerve:- spine:- retina:- eye:41.10 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:18.90 thymus:38.70 bone marrow:- adipose:- bone:38.40 skin:33.60
GeneChip cerebrum:5.54 cerebellum:5.58 brain stem:5.58 corpus callosum/glia:5.48 pineal gland:- peripheral nerve:5.61 spine:5.63 retina:- eye:- artery/aorta:5.48 vein:5.74 lymphnode:5.83 peripheral blood:- spleen:5.17 thymus:5.20 bone marrow:5.70 adipose:5.61 bone:- skin:5.60
CAGE cerebrum:0.20 cerebellum:- brain stem:0.35 corpus callosum/glia:0.43 pineal gland:2.43 peripheral nerve:- spine:0.95 retina:- eye:- artery/aorta:0.59 vein:0.59 lymphnode:1.43 peripheral blood:- spleen:0.51 thymus:0.91 bone marrow:- adipose:0 bone:- skin:-
RNA-seq cerebrum:0.06 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.45 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.01 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:63.80 placenta:211.30 prostate:22.50 ovary:- testis:30.30 heart:12.80 muscle:- esophagus:- stomach:- intestine:- colon:25.40     liver/hepato:-        lung:14.70    bladder:- kidney:93.60 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:18.60 salivary:-
GeneChip uterus:6.26 placenta:8.80 prostate:5.42 ovary:5.52 testis:5.97 heart:5.67 muscle:5.68 esophagus:5.86 stomach:5.41 intestine:5.60 colon:5.54 liver/hepato:5.19 lung:5.39 bladder:- kidney:6.61 pituitary:6.17 thyroid/parathyroid:5.26 adrenal gland:5.57 pancreas:6.12 breast:5.93 salivary:5.48
CAGE uterus:2.71 placenta:5.13 prostate:2.48 ovary:0.68 testis:1.54 heart:0.34 muscle:0.05 esophagus:0.40 stomach:- intestine:0 colon:0     liver/hepato:0    lung:0.28 bladder:0.53 kidney:0.78 pituitary:1.50 thyroid/parathyroid:0.06 adrenal gland:- pancreas:0 breast:1.16 salivary:0.36
RNA-seq uterus:- placenta:- prostate:0.52 ovary:0.47 testis:0.79 heart:0 muscle:0 esophagus:- stomach:- intestine:- colon:0.03     liver/hepato:0        lung:0.21    bladder:- kidney:0.91 pituitary:- thyroid/parathyroid:0.10 adrenal gland:1.19 pancreas:- breast:0.08 salivary:-

Gene Information

IDs

Refseq ID NM_022369
Gene ID 64220
Unigene ID Hs.24553
Probe set ID 221701_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000137868
GTEx ID ENSG00000137868

Orthologous Gene

Mouse[4]  NM_001162475, NM_001162476, NM_001162479, NM_009291
Rat[1]  NM_001029924, NM_001162476, NM_001162479, NM_009291

Chromosomal Region

15q24.1  [74,471,807  -  74,502,046]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

9203140
11256614
11358845
12477932
12975309
14702039
16344560
16712791
17255476
17273977
17503335
18316031
18387951
19112531
19213032
19309693
19500772
20301533
20379614
20625434
21901792
21963094
22283518
22665496
22686418
22826435
23449393
23464991
24284421

Gene Ontology  (GO ID)

Biological Process

GO:0030325  adrenal gland development
GO:0048844  artery morphogenesis
GO:0001568  blood vessel development
GO:0050890  cognition
GO:0048589  developmental growth
GO:0060539  diaphragm development
GO:0048546  digestive tract morphogenesis
GO:0043583  ear development
GO:0060900  embryonic camera-type eye formation
GO:0048566  embryonic gut development
GO:0060325  face morphogenesis
GO:0007631  feeding behavior
GO:0030540  female genitalia development
GO:0060322  head development
GO:0060323  head morphogenesis
GO:0007507  heart development
GO:0001822  kidney development
GO:0007612  learning
GO:0048286  lung alveolus development
GO:0030324  lung development
GO:0060426  lung vasculature development
GO:0050905  neuromuscular process
GO:0043585  nose morphogenesis
GO:0007603  phototransduction, visible light
GO:0048520  positive regulation of behavior
GO:0003184  pulmonary valve morphogenesis
GO:0042573  retinoic acid metabolic process
GO:0001523  retinoid metabolic process
GO:0048745  smooth muscle tissue development
GO:0003281  ventricular septum development
GO:0042297  vocal learning

Cellular Component

GO:0016021  integral to membrane
GO:0005886  plasma membrane
GO:0043234  protein complex

Molecular Function

GO:0004872  receptor activity
GO:0051183  vitamin transporter activity