TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 250kDa

Synonym

TAFII-250, TBP-associated factor 250 kDa, TAF1, Transcription initiation factor TFIID subunit 1, CCG1, P250, BA2R, Cell cycle gene 1 protein, TAF(II)250, p250, TAFII250, CCGS, NSCL2, TAF2A

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

nodata

GeneChip

cerebrum:5.72

cerebellum:5.43

brain stem:5.84

corpus callosum/glia:5.64

pineal gland:-

peripheral nerve:5.57

spine:5.48

retina:-

eye:-

artery/aorta:5.63

vein:5.94

lymphnode:5.73

peripheral blood:-

spleen:5.98

thymus:5.71

bone marrow:5.48

adipose:5.52

bone:-

skin:5.48

CAGE

cerebrum:3.44

cerebellum:-

brain stem:3.63

corpus callosum/glia:3.89

pineal gland:3.91

peripheral nerve:-

spine:3.66

retina:-

eye:-

artery/aorta:3.65

vein:3.64

lymphnode:3.38

peripheral blood:-

spleen:3.47

thymus:3.50

bone marrow:-

adipose:3.75

bone:-

skin:-

RNA-seq

cerebrum:1.68

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:1.81

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:1.74

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

nodata

GeneChip

uterus:5.89

placenta:5.34

prostate:5.60

ovary:6.01

testis:5.44

heart:5.87

muscle:5.62

esophagus:5.72

stomach:5.63

intestine:5.68

colon:5.59

liver/hepato:5.70

lung:5.55

bladder:-

kidney:5.63

pituitary:5.79

thyroid/parathyroid:5.74

adrenal gland:5.85

pancreas:5.93

breast:5.70

salivary:5.45

CAGE

uterus:3.90

placenta:3.08

prostate:3.59

ovary:3.54

testis:3.34

heart:3.20

muscle:3.45

esophagus:3.27

stomach:-

intestine:3.23

colon:3.12

liver/hepato:2.20

lung:3.30

bladder:3.60

kidney:3.00

pituitary:3.45

thyroid/parathyroid:3.11

adrenal gland:-

pancreas:3.26

breast:2.91

salivary:3.21

RNA-seq

uterus:-

placenta:-

prostate:1.40

ovary:2.75

testis:1.22

heart:1.63

muscle:1.42

esophagus:-

stomach:-

intestine:-

colon:1.95

liver/hepato:0.54

lung:0.66

bladder:-

kidney:1.89

pituitary:-

thyroid/parathyroid:1.90

adrenal gland:1.14

pancreas:-

breast:1.81

salivary:-

IDs

Refseq ID	NM_004606
Gene ID	6872
Unigene ID	-
Probe set ID	216711_s_at [HG-U133_Plus_2]
Ensembl ID	ENSG00000147133
GTEx ID	ENSG00000147133

Orthologous Gene

Mouse[1]	NM_001081008
Rat [0]

Chromosomal Region

Xq13.1 [70,586,114 - 70,752,224]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

Gene Ontology (GO ID)

Biological Process

GO:0000080	G1 phase of mitotic cell cycle
GO:0010467	gene expression
GO:0016573	histone acetylation
GO:0018105	peptidyl-serine phosphorylation
GO:0018107	peptidyl-threonine phosphorylation
GO:0032436	positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0045944	positive regulation of transcription from RNA polymerase II promoter
GO:0060261	positive regulation of transcription initiation from RNA polymerase II promoter
GO:0046777	protein amino acid autophosphorylation
GO:0000117	regulation of transcription involved in G2/M-phase of mitotic cell cycle
GO:0006974	response to DNA damage stimulus
GO:0006368	RNA elongation from RNA polymerase II promoter
GO:0051123	RNA polymerase II transcriptional preinitiation complex assembly
GO:0006366	transcription from RNA polymerase II promoter
GO:0006352	transcription initiation
GO:0006367	transcription initiation from RNA polymerase II promoter
GO:0016032	viral reproduction
GO:0019048	virus-host interaction

Cellular Component

GO:0071339	MLL1 complex
GO:0005730	nucleolus
GO:0005654	nucleoplasm
GO:0005634	nucleus
GO:0005669	transcription factor TFIID complex

Molecular Function

GO:0005524	ATP binding
GO:0044212	DNA regulatory region binding
GO:0070577	histone acetyl-lysine binding
GO:0004402	histone acetyltransferase activity
GO:0002039	p53 binding
GO:0005515	protein binding
GO:0004674	protein serine/threonine kinase activity
GO:0043565	sequence-specific DNA binding
GO:0017025	TATA-binding protein binding
GO:0003713	transcription coactivator activity
GO:0008134	transcription factor binding

TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 250kDa

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function