TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa

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Synonym

TAFIID32, MGC:1603, MGC3647, AD-004, MGC:3647, TAFII-31, TAF2G, TAFII-32, MGC1603, CGI-137, CIP, MGC5067, MGC:5067, CINAP, TAF9, TAFII32, Transcription initiation factor TFIID subunit 9, STAF31/32, TAFII31

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST nodata
GeneChip cerebrum:6.57 cerebellum:6.52 brain stem:6.67 corpus callosum/glia:6.40 pineal gland:- peripheral nerve:6.34 spine:6.47 retina:- eye:- artery/aorta:6.30 vein:6.63 lymphnode:6.34 peripheral blood:- spleen:6.34 thymus:7.33 bone marrow:6.20 adipose:6.68 bone:- skin:6.55
CAGE cerebrum:3.71 cerebellum:- brain stem:3.81 corpus callosum/glia:3.26 pineal gland:3.55 peripheral nerve:- spine:3.60 retina:- eye:- artery/aorta:3.26 vein:3.35 lymphnode:3.43 peripheral blood:- spleen:3.87 thymus:3.81 bone marrow:- adipose:4.12 bone:- skin:-
RNA-seq cerebrum:4.91 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:4.54 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:4.14 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST nodata
GeneChip uterus:6.88 placenta:6.65 prostate:7.28 ovary:6.91 testis:7.42 heart:6.69 muscle:7.33 esophagus:6.23 stomach:6.44 intestine:6.75 colon:5.56 liver/hepato:6.55 lung:6.26 bladder:- kidney:6.50 pituitary:6.14 thyroid/parathyroid:6.74 adrenal gland:7.04 pancreas:6.78 breast:6.29 salivary:6.40
CAGE uterus:3.55 placenta:3.75 prostate:3.75 ovary:3.72 testis:4.77 heart:3.71 muscle:4.03 esophagus:4.04 stomach:- intestine:3.90 colon:3.46     liver/hepato:4.34    lung:3.62 bladder:3.78 kidney:4.04 pituitary:4.04 thyroid/parathyroid:3.87 adrenal gland:- pancreas:3.50 breast:3.73 salivary:3.46
RNA-seq uterus:- placenta:- prostate:4.59 ovary:4.86 testis:5.08 heart:4.10 muscle:4.32 esophagus:- stomach:- intestine:- colon:4.77     liver/hepato:4.20        lung:4.26    bladder:- kidney:5.29 pituitary:- thyroid/parathyroid:5.32 adrenal gland:4.45 pancreas:- breast:5.00 salivary:-

Gene Information

IDs

Refseq ID NM_016283
Gene ID 6880
Unigene ID -
Probe set ID 203893_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000085231
GTEx ID ENSG00000085231

Orthologous Gene

Mouse[4]  NM_001015889, NM_027139
Rat[3]  NM_001012463, NM_001037310, NM_184048

Chromosomal Region

5q13.2  [68,646,811  -  68,665,840]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

1939271
2449431
7597030
7667268
7761466
7809597
7835343
7836461
7933101
8121496
8401585
8680883
8764009
8764062
8849451
8946909
9045704
9054383
9153318
9171108
9177216
9405375
9611234
9674425
9792714
9885574
10191103
10449590
10810093
10821850
10931946
11005381
11278372
11406595
11564863
12101418
12453419
12477932
12601814
12660246
12837753
14580349
15081896
15489227
15489334
15601843
15641800
15899866
15932940
15960975
16079131
16169070
16189514
16713569
17081983
17636026
17643375
17884155
17967894
18250150
19240132
19251649
19471022
19615732
19643037
20186459
20195357
20946988
21139048
21693764
21729782
21832049
21890473
21963094
21988832
22053931
22505724
22696218
22939629
23000965
23246961
24816145

Gene Ontology  (GO ID)

Biological Process

GO:0010467  gene expression
GO:0043966  histone H3 acetylation
GO:0043066  negative regulation of apoptosis
GO:0032435  negative regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0030307  positive regulation of cell growth
GO:0060760  positive regulation of response to cytokine stimulus
GO:0045944  positive regulation of transcription from RNA polymerase II promoter
GO:0050821  protein stabilization
GO:0006974  response to DNA damage stimulus
GO:0070555  response to interleukin-1
GO:0006368  RNA elongation from RNA polymerase II promoter
GO:0006366  transcription from RNA polymerase II promoter
GO:0006367  transcription initiation from RNA polymerase II promoter
GO:0016032  viral reproduction

Cellular Component

GO:0015030  Cajal body
GO:0071339  MLL1 complex
GO:0005730  nucleolus
GO:0005654  nucleoplasm
GO:0000125  PCAF complex
GO:0070761  pre-snoRNP complex
GO:0030914  STAGA complex
GO:0005669  transcription factor TFIID complex
GO:0033276  transcription factor TFTC complex

Molecular Function

GO:0004017  adenylate kinase activity
GO:0005524  ATP binding
GO:0070742  C2H2 zinc finger domain binding
GO:0003677  DNA binding
GO:0044212  DNA regulatory region binding
GO:0004402  histone acetyltransferase activity
GO:0002039  p53 binding
GO:0005515  protein binding
GO:0046982  protein heterodimerization activity
GO:0033613  transcription activator binding
GO:0003713  transcription coactivator activity