transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)

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Synonym

SIII p15, Elongin 15 kDa subunit, EloC, TCEB1, Transcription elongation factor B polypeptide 1, Elongin-C

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:54.50

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:148.30

peripheral nerve:-

spine:-

retina:-

eye:41.10

artery/aorta:-

vein:-

lymphnode:91

peripheral blood:-

spleen:-

thymus:77.30

bone marrow:39.40

adipose:40.30

bone:12.80

skin:72

GeneChip

cerebrum:7.83

cerebellum:7.72

brain stem:7.90

corpus callosum/glia:7.39

pineal gland:-

peripheral nerve:7.99

spine:7.77

retina:-

eye:-

artery/aorta:7.61

vein:7.95

lymphnode:7.69

peripheral blood:-

spleen:7.39

thymus:8.40

bone marrow:7.40

adipose:7.90

bone:-

skin:8.03

CAGE

cerebrum:3.95

cerebellum:-

brain stem:3.66

corpus callosum/glia:3.09

pineal gland:3.92

peripheral nerve:-

spine:4.07

retina:-

eye:-

artery/aorta:3.73

vein:3.50

lymphnode:3.69

peripheral blood:-

spleen:3.47

thymus:3.33

bone marrow:-

adipose:3.51

bone:-

skin:-

RNA-seq

cerebrum:3.69

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:3.17

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:3.14

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:63.80

placenta:21.90

prostate:22.50

ovary:-

testis:77.90

heart:102.20

muscle:20.10

esophagus:-

stomach:85

intestine:-

colon:67.80

liver/hepato:21.10

lung:102.60

bladder:-

kidney:31.20

pituitary:-

thyroid/parathyroid:-

adrenal gland:-

pancreas:62.20

breast:18.60

salivary:-

GeneChip

uterus:7.74

placenta:7.83

prostate:8.02

ovary:7.84

testis:9.68

heart:8.40

muscle:8.98

esophagus:8.42

stomach:7.35

intestine:7.81

colon:7.31

liver/hepato:7.35

lung:7.77

bladder:-

kidney:7.61

pituitary:7.50

thyroid/parathyroid:7.43

adrenal gland:7.93

pancreas:7.31

breast:7.61

salivary:7.45

CAGE

uterus:3.18

placenta:3.70

prostate:3.22

ovary:3.18

testis:4.45

heart:4.37

muscle:4.24

esophagus:3.69

stomach:-

intestine:3.17

colon:3.30

liver/hepato:3.95

lung:3.74

bladder:3.50

kidney:3.70

pituitary:3.55

thyroid/parathyroid:3.21

adrenal gland:-

pancreas:3.65

breast:3.76

salivary:3.38

RNA-seq

uterus:-

placenta:-

prostate:3.36

ovary:2.93

testis:4.29

heart:3.47

muscle:2.84

esophagus:-

stomach:-

intestine:-

colon:3.07

liver/hepato:2.96

lung:3.32

bladder:-

kidney:3.45

pituitary:-

thyroid/parathyroid:3.59

adrenal gland:3.64

pancreas:-

breast:3.70

salivary:-

IDs

Refseq ID	NM_005648
Gene ID	6921
Unigene ID	Hs.554594
Probe set ID	202824_s_at [HG-U133_Plus_2]
Ensembl ID	ENSG00000154582
GTEx ID	ENSG00000154582

Orthologous Gene

Mouse[3]	NM_026456
Rat [0]

Chromosomal Region

8q21.11 [74,857,354 - 74,884,522]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

IPR001232

SKP1 component

GO:0071456	cellular response to hypoxia
GO:0010467	gene expression
GO:0032968	positive regulation of RNA elongation from RNA polymerase II promoter
GO:0050434	positive regulation of viral transcription
GO:0006357	regulation of transcription from RNA polymerase II promoter
GO:0006368	RNA elongation from RNA polymerase II promoter
GO:0006366	transcription from RNA polymerase II promoter
GO:0006511	ubiquitin-dependent protein catabolic process
GO:0016032	viral reproduction
GO:0019048	virus-host interaction

GO:0005829	cytosol
GO:0005654	nucleoplasm
GO:0030891	VCB complex

GO:0005515	protein binding
GO:0032403	protein complex binding

transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function