transcription factor 21

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Synonym

Transcription factor 21, Pod-1, Podocyte-expressed 1, POD1, Capsulin, Epicardin, TCF21, transcription factor 21

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:- cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:94.50 thymus:- bone marrow:19.70 adipose:- bone:- skin:9.60
GeneChip cerebrum:3.33 cerebellum:3.35 brain stem:3.44 corpus callosum/glia:3.26 pineal gland:- peripheral nerve:3.31 spine:3.25 retina:- eye:- artery/aorta:4.89 vein:4.26 lymphnode:3.59 peripheral blood:- spleen:8.60 thymus:3.25 bone marrow:3.45 adipose:4.29 bone:- skin:3.94
CAGE cerebrum:0.07 cerebellum:- brain stem:0 corpus callosum/glia:1.19 pineal gland:0.62 peripheral nerve:- spine:0.17 retina:- eye:- artery/aorta:1.85 vein:1.76 lymphnode:0.85 peripheral blood:- spleen:5.21 thymus:0.06 bone marrow:- adipose:0.63 bone:- skin:-
RNA-seq cerebrum:0.01 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.92 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.47 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:45.60 placenta:127.50 prostate:45.10 ovary:260.80 testis:4.30 heart:25.50 muscle:- esophagus:- stomach:- intestine:64.80 colon:8.50     liver/hepato:-        lung:73.30    bladder:- kidney:104 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:17.80 breast:- salivary:-
GeneChip uterus:5.30 placenta:7.45 prostate:6.47 ovary:6.12 testis:3.97 heart:5.08 muscle:3.55 esophagus:4.34 stomach:6.25 intestine:5.98 colon:6.72 liver/hepato:4 lung:8.60 bladder:- kidney:6.37 pituitary:4.42 thyroid/parathyroid:3.39 adrenal gland:5.12 pancreas:4.50 breast:3.25 salivary:3.22
CAGE uterus:3.93 placenta:5.05 prostate:5.38 ovary:5.38 testis:2.95 heart:3.92 muscle:1.01 esophagus:4.23 stomach:- intestine:3.89 colon:4.21     liver/hepato:2.63    lung:5.50 bladder:4.26 kidney:4.07 pituitary:1.66 thyroid/parathyroid:1.15 adrenal gland:- pancreas:1.42 breast:1.16 salivary:0.62
RNA-seq uterus:- placenta:- prostate:2.09 ovary:3.11 testis:1.91 heart:0.50 muscle:0.06 esophagus:- stomach:- intestine:- colon:2.56     liver/hepato:0.41        lung:3.42    bladder:- kidney:3.09 pituitary:- thyroid/parathyroid:0.12 adrenal gland:0.17 pancreas:- breast:0.09 salivary:-

Gene Information

IDs

Refseq ID NM_198392
Gene ID 6943
Unigene ID Hs.78061
Probe set ID 204931_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000118526
GTEx ID ENSG00000118526

Orthologous Gene

Mouse[1]  NM_011545
Rat [0]  

Chromosomal Region

6q23.2  [134,210,276  -  134,216,691]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

7553065
8889548
9507058
9545526
9733105
10572052
11591653
12477932
12493738
14574404
14702039
15231748
15489334
16169070
16415157
18978678
20211142
20634891
20945327
21378990
21771727
21988832
22751097
22862160
23313103
23529585
23874238
24262325

Gene Ontology  (GO ID)

Biological Process

GO:0001658  branching involved in ureteric bud morphogenesis
GO:0014707  branchiomeric skeletal muscle development
GO:0060435  bronchiole development
GO:0060539  diaphragm development
GO:0048557  embryonic digestive tract morphogenesis
GO:0030855  epithelial cell differentiation
GO:0048732  gland development
GO:0032835  glomerulus development
GO:0001822  kidney development
GO:0048286  lung alveolus development
GO:0060425  lung morphogenesis
GO:0060426  lung vasculature development
GO:0001763  morphogenesis of a branching structure
GO:0060766  negative regulation of androgen receptor signaling pathway
GO:0000122  negative regulation of transcription from RNA polymerase II promoter
GO:0060021  palate development
GO:0045944  positive regulation of transcription from RNA polymerase II promoter
GO:0048608  reproductive structure development
GO:0060541  respiratory system development
GO:0060008  Sertoli cell differentiation
GO:0007530  sex determination
GO:0048536  spleen development
GO:0001657  ureteric bud development
GO:0001944  vasculature development

Cellular Component

GO:0005634  nucleus

Molecular Function

GO:0050681  androgen receptor binding
GO:0043425  bHLH transcription factor binding
GO:0070888  E-box binding
GO:0042826  histone deacetylase binding
GO:0046983  protein dimerization activity