troponin C type 2 (fast)

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Synonym

TNNC2, Troponin C, skeletal muscle, troponin C type 2 (fast)

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:5.90 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:30.70 spine:- retina:- eye:17.60 artery/aorta:209.80 vein:- lymphnode:- peripheral blood:- spleen:- thymus:12.90 bone marrow:- adipose:5606.40 bone:- skin:52.80
GeneChip cerebrum:5.27 cerebellum:5.30 brain stem:5.14 corpus callosum/glia:4.87 pineal gland:- peripheral nerve:4.93 spine:4.87 retina:- eye:- artery/aorta:5.28 vein:5.53 lymphnode:5.15 peripheral blood:- spleen:4.84 thymus:4.91 bone marrow:5.15 adipose:5.50 bone:- skin:6.87
CAGE cerebrum:0.02 cerebellum:- brain stem:0 corpus callosum/glia:0.07 pineal gland:0.36 peripheral nerve:- spine:0 retina:- eye:- artery/aorta:1.57 vein:4.78 lymphnode:2.26 peripheral blood:- spleen:0 thymus:0.37 bone marrow:- adipose:5.14 bone:- skin:-
RNA-seq cerebrum:1.05 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:1.59 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.60 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:10.90 prostate:33.80 ovary:- testis:4.30 heart:38.30 muscle:6328.50 esophagus:- stomach:- intestine:- colon:-     liver/hepato:31.70        lung:39.10    bladder:- kidney:10.40 pituitary:- thyroid/parathyroid:- adrenal gland:50.80 pancreas:71.10 breast:- salivary:-
GeneChip uterus:5.06 placenta:4.80 prostate:4.86 ovary:5.15 testis:5.41 heart:5.16 muscle:13.23 esophagus:9.22 stomach:5.02 intestine:6.55 colon:5.47 liver/hepato:4.75 lung:5.30 bladder:- kidney:5 pituitary:5.27 thyroid/parathyroid:5.63 adrenal gland:5.31 pancreas:5.30 breast:5.10 salivary:5.46
CAGE uterus:0.15 placenta:0 prostate:1.23 ovary:0.07 testis:0.54 heart:0.11 muscle:8.72 esophagus:4.06 stomach:- intestine:0 colon:0.04     liver/hepato:0    lung:0 bladder:0.69 kidney:0.08 pituitary:0 thyroid/parathyroid:3.14 adrenal gland:- pancreas:0.58 breast:0 salivary:2.93
RNA-seq uterus:- placenta:- prostate:1.81 ovary:1.53 testis:3.73 heart:0.14 muscle:9.90 esophagus:- stomach:- intestine:- colon:1.55     liver/hepato:0.07        lung:1.40    bladder:- kidney:0.12 pituitary:- thyroid/parathyroid:8.18 adrenal gland:0.39 pancreas:- breast:8.32 salivary:-

Gene Information

IDs

Refseq ID NM_003279
Gene ID 7125
Unigene ID Hs.182421
Probe set ID 205388_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000101470
GTEx ID ENSG00000101470

Orthologous Gene

Mouse[1]  NM_009394
Rat [0]  

Chromosomal Region

20q13.12  [44,451,853  -  44,462,384]

Gene Family (Interpro ID)

IPR002048  Calcium-binding EF-hand
IPR018249  EF-HAND 2

Link to Pubmed  (Pubmed ID)

978749
1907279
2373703
3166492
7869399
9016781
9459007
9560191
11780052
12477932
15489334
17194691
19460752
19913121
20628086

Gene Ontology  (GO ID)

Biological Process

GO:0030049  muscle filament sliding
GO:0006937  regulation of muscle contraction
GO:0003009  skeletal muscle contraction

Cellular Component

GO:0005829  cytosol
GO:0005861  troponin complex

Molecular Function

GO:0003779  actin binding
GO:0005509  calcium ion binding