trophoblast glycoprotein

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Synonym

5T4 oncotrophoblast glycoprotein, TPBG, 5T4 oncofetal trophoblast glycoprotein, 5T4, trophoblast glycoprotein, Trophoblast glycoprotein precursor, 5T4 oncofetal antigen, 5T4-AG, M6P1

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:15.40 cerebellum:- brain stem:- corpus callosum/glia:29.20 pineal gland:- peripheral nerve:92 spine:- retina:- eye:58.80 artery/aorta:149.90 vein:- lymphnode:- peripheral blood:- spleen:18.90 thymus:38.70 bone marrow:- adipose:- bone:25.60 skin:14.40
GeneChip cerebrum:6.92 cerebellum:5.09 brain stem:8.14 corpus callosum/glia:6.16 pineal gland:- peripheral nerve:7.17 spine:7.77 retina:- eye:- artery/aorta:7.75 vein:7.74 lymphnode:7.10 peripheral blood:- spleen:7.66 thymus:6.99 bone marrow:5.61 adipose:7.72 bone:- skin:8.04
CAGE cerebrum:2.02 cerebellum:- brain stem:2.69 corpus callosum/glia:1.76 pineal gland:1.90 peripheral nerve:- spine:2.13 retina:- eye:- artery/aorta:2.65 vein:2.37 lymphnode:1.76 peripheral blood:- spleen:2.57 thymus:2.11 bone marrow:- adipose:2.62 bone:- skin:-
RNA-seq cerebrum:1.32 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:3.53 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:2.42 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:36.50 placenta:36.40 prostate:33.80 ovary:- testis:17.30 heart:63.90 muscle:- esophagus:- stomach:21.20 intestine:32.40 colon:-     liver/hepato:10.60        lung:53.80    bladder:251.20 kidney:10.40 pituitary:- thyroid/parathyroid:163.70 adrenal gland:- pancreas:35.60 breast:55.80 salivary:-
GeneChip uterus:9.03 placenta:8.90 prostate:7.96 ovary:7.93 testis:6.87 heart:7.51 muscle:5.60 esophagus:8.74 stomach:7.69 intestine:7.57 colon:7.31 liver/hepato:4.98 lung:7.29 bladder:- kidney:6.89 pituitary:7.73 thyroid/parathyroid:8.60 adrenal gland:6.74 pancreas:6.47 breast:9.25 salivary:7.78
CAGE uterus:3.42 placenta:3.48 prostate:3.47 ovary:2.60 testis:2.28 heart:2.35 muscle:1.39 esophagus:4.25 stomach:- intestine:2.11 colon:1.89     liver/hepato:0.96    lung:2.00 bladder:3.81 kidney:2.48 pituitary:3.01 thyroid/parathyroid:3.27 adrenal gland:- pancreas:1.98 breast:2.95 salivary:2.35
RNA-seq uterus:- placenta:- prostate:4.35 ovary:2.27 testis:2.66 heart:1.22 muscle:1.06 esophagus:- stomach:- intestine:- colon:2.80     liver/hepato:0.40        lung:2.43    bladder:- kidney:2.75 pituitary:- thyroid/parathyroid:2.22 adrenal gland:2.22 pancreas:- breast:2.19 salivary:-

Gene Information

IDs

Refseq ID NM_001166392
Gene ID 7162
Unigene ID Hs.82128
Probe set ID 203476_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000146242
GTEx ID ENSG00000146242

Orthologous Gene

Mouse[12]  NM_001164792, NM_011627
Rat[1]  NM_031807, NM_011627

Chromosomal Region

6q14.1  [83,072,923  -  83,080,545]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

7593330
8132670
8895545
10366710
11798178
11903056
12477932
12481437
14574404
15489334
16303743
16616918
16646078
17978129
18567615
18833005
21139048
22498111
22939629
22956548
24583282

Gene Ontology  (GO ID)

Biological Process

GO:0007155  cell adhesion

Cellular Component

GO:0005783  endoplasmic reticulum
GO:0005887  integral to plasma membrane