transient receptor potential cation channel, subfamily C, member 6

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Synonym

Short transient receptor potential channel 6, TRPC6, FLJ14863, TRP6, TrpC6, FSGS2, FLJ11098

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:5.90

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:11.80

artery/aorta:-

vein:-

lymphnode:-

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:-

bone:-

skin:4.80

GeneChip

cerebrum:3.03

cerebellum:2.99

brain stem:3.11

corpus callosum/glia:3.05

pineal gland:-

peripheral nerve:2.87

spine:3.01

retina:-

eye:-

artery/aorta:3.08

vein:3.07

lymphnode:2.91

peripheral blood:-

spleen:2.97

thymus:2.81

bone marrow:3.10

adipose:3.11

bone:-

skin:3.12

CAGE

cerebrum:0.84

cerebellum:-

brain stem:0.48

corpus callosum/glia:0.88

pineal gland:0.64

peripheral nerve:-

spine:0.34

retina:-

eye:-

artery/aorta:1.16

vein:0.96

lymphnode:0.88

peripheral blood:-

spleen:1.21

thymus:0.28

bone marrow:-

adipose:2.05

bone:-

skin:-

RNA-seq

cerebrum:0.34

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:1.00

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:1.55

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:9.10

placenta:40.10

prostate:33.80

ovary:-

testis:-

heart:51.10

muscle:-

esophagus:-

stomach:-

intestine:-

colon:8.50

liver/hepato:-

lung:48.90

bladder:-

kidney:-

pituitary:-

thyroid/parathyroid:-

adrenal gland:-

pancreas:-

breast:-

salivary:-

GeneChip

uterus:3.39

placenta:3.62

prostate:3.08

ovary:3.30

testis:2.92

heart:3.10

muscle:3.03

esophagus:3.04

stomach:3.15

intestine:3.11

colon:3.23

liver/hepato:2.95

lung:3.78

bladder:-

kidney:3.05

pituitary:2.90

thyroid/parathyroid:3.38

adrenal gland:2.99

pancreas:2.99

breast:2.98

salivary:3.02

CAGE

uterus:2.30

placenta:2.57

prostate:1.42

ovary:1.25

testis:0.76

heart:0.57

muscle:0.65

esophagus:2.62

stomach:-

intestine:1.15

colon:1.72

liver/hepato:0.26

lung:3.53

bladder:0.95

kidney:0.78

pituitary:0.34

thyroid/parathyroid:2.09

adrenal gland:-

pancreas:0

breast:2.47

salivary:0.83

RNA-seq

uterus:-

placenta:-

prostate:0.80

ovary:0.92

testis:0.99

heart:0.32

muscle:0.08

esophagus:-

stomach:-

intestine:-

colon:1.46

liver/hepato:0.03

lung:3.75

bladder:-

kidney:1.05

pituitary:-

thyroid/parathyroid:1.93

adrenal gland:0.48

pancreas:-

breast:1.66

salivary:-

IDs

Refseq ID	NM_004621
Gene ID	7225
Unigene ID	Hs.159003
Probe set ID	206528_at [HG-U133_Plus_2]
Ensembl ID	ENSG00000137672
GTEx ID	ENSG00000137672

Orthologous Gene

Mouse[1]	NM_013838
Rat[1]	NM_053559

Chromosomal Region

11q22.1 [101,322,295 - 101,743,293]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

IPR004729	Transient receptor potential channel
IPR005462	Transient receptor potential channel 6
IPR002153	Transient receptor potential protein

GO:0007411	axon guidance
GO:0007596	blood coagulation
GO:0006812	cation transport
GO:0007204	elevation of cytosolic calcium ion concentration
GO:0030168	platelet activation
GO:0051928	positive regulation of calcium ion transport
GO:0032414	positive regulation of ion transmembrane transporter activity

GO:0016021	integral to membrane
GO:0005886	plasma membrane

GO:0070679	inositol 1,4,5 trisphosphate binding
GO:0005515	protein binding
GO:0015279	store-operated calcium channel activity

transient receptor potential cation channel, subfamily C, member 6

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function