TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa

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Synonym

MGC5306, JOSD3, Protein JOSD3, Josephin domain containing 3

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:48.60 cerebellum:75.60 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:92 spine:112.30 retina:- eye:76.40 artery/aorta:60 vein:- lymphnode:161.80 peripheral blood:36.40 spleen:94.50 thymus:206.10 bone marrow:59 adipose:- bone:51.20 skin:24
GeneChip cerebrum:7.18 cerebellum:6.77 brain stem:7.28 corpus callosum/glia:7.38 pineal gland:- peripheral nerve:6.80 spine:7.25 retina:- eye:- artery/aorta:7.23 vein:6.84 lymphnode:7.96 peripheral blood:- spleen:7.61 thymus:8.06 bone marrow:7.37 adipose:7.13 bone:- skin:7.62
CAGE cerebrum:3.70 cerebellum:- brain stem:3.73 corpus callosum/glia:2.87 pineal gland:3.95 peripheral nerve:- spine:4.30 retina:- eye:- artery/aorta:3.38 vein:3.97 lymphnode:3.66 peripheral blood:- spleen:3.77 thymus:3.61 bone marrow:- adipose:3.83 bone:- skin:-
RNA-seq cerebrum:3.73 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:4.35 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:4.10 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:227.80 placenta:83.80 prostate:56.30 ovary:37.30 testis:56.20 heart:166 muscle:20.10 esophagus:342.80 stomach:85 intestine:291.60 colon:50.90     liver/hepato:137.20        lung:127.10    bladder:753.70 kidney:197.50 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:71.10 breast:27.90 salivary:-
GeneChip uterus:7.71 placenta:7.08 prostate:7.64 ovary:7.96 testis:6.63 heart:6.83 muscle:6.92 esophagus:7.43 stomach:7.26 intestine:7.25 colon:6.37 liver/hepato:6.98 lung:7.24 bladder:- kidney:6.47 pituitary:6.71 thyroid/parathyroid:7.18 adrenal gland:7.02 pancreas:7.45 breast:7.35 salivary:6.76
CAGE uterus:4.02 placenta:3.80 prostate:3.89 ovary:3.92 testis:3.04 heart:3.62 muscle:4.52 esophagus:3.78 stomach:- intestine:3.52 colon:3.49     liver/hepato:3.23    lung:3.87 bladder:4.53 kidney:3.53 pituitary:4.35 thyroid/parathyroid:3.60 adrenal gland:- pancreas:3.67 breast:3.58 salivary:3.13
RNA-seq uterus:- placenta:- prostate:4.75 ovary:4.57 testis:3.83 heart:2.80 muscle:4.26 esophagus:- stomach:- intestine:- colon:4.47     liver/hepato:3.01        lung:4.65    bladder:- kidney:3.21 pituitary:- thyroid/parathyroid:4.32 adrenal gland:4.29 pancreas:- breast:3.56 salivary:-

Gene Information

IDs

Refseq ID NM_024116
Gene ID 79101
Unigene ID Hs.355750
Probe set ID 221580_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000166012
GTEx ID ENSG00000166012

Orthologous Gene

Mouse[3]  NM_027261, NM_029248
Rat[1]  NM_001014207, NM_029248

Chromosomal Region

11q21  [93,463,114  -  93,517,557]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

12477932
14702039
15489334
15520167
16169070
17207965
17318177
19615732
21386990
21890473
21900206

Gene Ontology  (GO ID)

Biological Process

GO:0006355  regulation of transcription, DNA-dependent
GO:0006351  transcription, DNA-dependent

Cellular Component

GO:0005634  nucleus

Molecular Function

GO:0003677  DNA binding
GO:0005515  protein binding