EF-hand domain family, member D2

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Synonym

SWS1, MGC4342, EF hand domain containing 2, EF-hand domain family, member D2, EF-hand domain-containing protein 2, EFHD2, RP3-467K16.3, Swiprosin-1

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:19 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:296.70 peripheral nerve:61.30 spine:- retina:118.60 eye:94 artery/aorta:- vein:66.60 lymphnode:141.50 peripheral blood:72.90 spleen:56.70 thymus:12.90 bone marrow:98.40 adipose:- bone:38.40 skin:9.60
GeneChip cerebrum:6.74 cerebellum:6.40 brain stem:7.28 corpus callosum/glia:5.86 pineal gland:- peripheral nerve:5.78 spine:6.39 retina:- eye:- artery/aorta:6.47 vein:6.26 lymphnode:7.67 peripheral blood:- spleen:8.53 thymus:6.83 bone marrow:8.09 adipose:7.04 bone:- skin:7.06
CAGE cerebrum:3.55 cerebellum:- brain stem:4.24 corpus callosum/glia:3.13 pineal gland:2.87 peripheral nerve:- spine:2.99 retina:- eye:- artery/aorta:3.25 vein:3.70 lymphnode:4.43 peripheral blood:- spleen:4.83 thymus:3.73 bone marrow:- adipose:3.41 bone:- skin:-
RNA-seq cerebrum:4.61 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:4.44 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:4.04 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:36.50 placenta:40.10 prostate:90.10 ovary:37.30 testis:38.90 heart:- muscle:- esophagus:- stomach:63.70 intestine:32.40 colon:25.40     liver/hepato:10.60        lung:88    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:50.80 pancreas:62.20 breast:9.30 salivary:-
GeneChip uterus:6.53 placenta:6.81 prostate:7.06 ovary:6.36 testis:8.31 heart:5.85 muscle:5.65 esophagus:6.89 stomach:7.49 intestine:7.26 colon:7.66 liver/hepato:6.70 lung:7.40 bladder:- kidney:5.93 pituitary:6.54 thyroid/parathyroid:7.11 adrenal gland:7.64 pancreas:6.58 breast:6.73 salivary:6.42
CAGE uterus:3.13 placenta:3.80 prostate:3.49 ovary:3.26 testis:4.33 heart:3.09 muscle:2.21 esophagus:3.77 stomach:- intestine:4.84 colon:4.24     liver/hepato:3.29    lung:3.84 bladder:3.37 kidney:3.00 pituitary:2.79 thyroid/parathyroid:3.73 adrenal gland:- pancreas:3.92 breast:2.87 salivary:2.85
RNA-seq uterus:- placenta:- prostate:3.82 ovary:4.04 testis:4.73 heart:2.10 muscle:1.09 esophagus:- stomach:- intestine:- colon:4.14     liver/hepato:2.57        lung:4.91    bladder:- kidney:2.89 pituitary:- thyroid/parathyroid:3.25 adrenal gland:4.91 pancreas:- breast:3.54 salivary:-

Gene Information

IDs

Refseq ID NM_024329
Gene ID 79180
Unigene ID Hs.465374
Probe set ID 217992_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000142634
GTEx ID ENSG00000142634

Orthologous Gene

Mouse[1]  NM_025994
Rat[1]  NM_001031648

Chromosomal Region

1p36.21  [15,736,391  -  15,756,839]

Gene Family (Interpro ID)

IPR002048  Calcium-binding EF-hand
IPR018249  EF-HAND 2

Link to Pubmed  (Pubmed ID)

11788997
12477932
15274114
15489334
16341674
16964243
17081983
17673920
19165527
19322201
19693767
20471030
20876399
21139048
21244694
21832049
21890473
21963094
21965664
22268729
22863883
23000965
23331044
23398456
23959172
23977092
24816145

Gene Ontology  (GO ID)

Cellular Component

GO:0045121  membrane raft

Molecular Function

GO:0005509  calcium ion binding