coiled-coil domain containing 55

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Synonym

DKFZP434K1421, CCDC55, coiled-coil domain containing 55, HSPC095, Coiled-coil domain-containing protein 55

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:17.80 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:148.30 peripheral nerve:92 spine:- retina:- eye:23.50 artery/aorta:30 vein:- lymphnode:30.30 peripheral blood:18.20 spleen:75.60 thymus:12.90 bone marrow:59 adipose:- bone:25.60 skin:81.60
GeneChip nodata
CAGE cerebrum:3.76 cerebellum:- brain stem:4.05 corpus callosum/glia:3.85 pineal gland:4.48 peripheral nerve:- spine:4.61 retina:- eye:- artery/aorta:3.53 vein:3.43 lymphnode:3.22 peripheral blood:- spleen:3.70 thymus:3.40 bone marrow:- adipose:3.92 bone:- skin:-
RNA-seq cerebrum:3.99 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:3.23 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:4.08 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:45.60 placenta:14.60 prostate:- ovary:37.30 testis:30.30 heart:12.80 muscle:20.10 esophagus:- stomach:85 intestine:- colon:76.30     liver/hepato:42.20        lung:29.30    bladder:- kidney:41.60 pituitary:232 thyroid/parathyroid:327.50 adrenal gland:- pancreas:17.80 breast:83.60 salivary:-
GeneChip nodata
CAGE uterus:3.86 placenta:3.52 prostate:3.85 ovary:3.77 testis:3.66 heart:3.77 muscle:4.09 esophagus:3.71 stomach:- intestine:3.59 colon:3.66     liver/hepato:3.45    lung:3.62 bladder:4.18 kidney:3.68 pituitary:4.35 thyroid/parathyroid:3.58 adrenal gland:- pancreas:3.90 breast:3.09 salivary:3.91
RNA-seq uterus:- placenta:- prostate:4.14 ovary:4.44 testis:4.43 heart:3.40 muscle:3.39 esophagus:- stomach:- intestine:- colon:4.37     liver/hepato:2.85        lung:3.44    bladder:- kidney:3.75 pituitary:- thyroid/parathyroid:5.04 adrenal gland:4.53 pancreas:- breast:3.89 salivary:-

Gene Information

IDs

Refseq ID NM_032141
Gene ID 84081
Unigene ID Hs.462663
Probe set ID -
Ensembl ID ENSG00000126653
GTEx ID ENSG00000126653

Orthologous Gene

Mouse[1]  NM_001012309
Rat[1]  NM_001037189

Chromosomal Region

17q11.2  [28,443,799  -  28,513,493]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

11076863
11230166
11256614
12477932
14702039
15489334
15489336
16381901
16964243
17081983
19047128
19471022
19953087
21832049
22365833
22990118
23602568
23940030
24816145

Gene Ontology  (GO ID)

Biological Process

GO:0032502  developmental process
GO:0006397  mRNA processing
GO:0006913  nucleocytoplasmic transport
GO:0000381  regulation of alternative nuclear mRNA splicing, via spliceosome
GO:0008380  RNA splicing

Cellular Component

GO:0016607  nuclear speck
GO:0005634  nucleus
GO:0030529  ribonucleoprotein complex

Molecular Function

GO:0003729  mRNA binding
GO:0005515  protein binding