forkhead box N1

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Synonym

forkhead box N1, FKHL20, winged-helix nude, Rowett nude, Forkhead box protein N1, WHN, Transcription factor winged-helix nude, FOXN1, RONU

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST nodata
GeneChip cerebrum:4.56 cerebellum:4.44 brain stem:4.62 corpus callosum/glia:4.40 pineal gland:- peripheral nerve:4.25 spine:4.38 retina:- eye:- artery/aorta:4.53 vein:4.90 lymphnode:4.43 peripheral blood:- spleen:4.11 thymus:4.21 bone marrow:4.54 adipose:4.53 bone:- skin:4.63
CAGE cerebrum:0 cerebellum:- brain stem:0 corpus callosum/glia:0 pineal gland:0 peripheral nerve:- spine:0 retina:- eye:- artery/aorta:0 vein:1.03 lymphnode:1.19 peripheral blood:- spleen:0 thymus:2.05 bone marrow:- adipose:0 bone:- skin:-
RNA-seq cerebrum:0.00 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.02 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST nodata
GeneChip uterus:4.24 placenta:4.31 prostate:4.30 ovary:4.23 testis:4.33 heart:4.70 muscle:4.92 esophagus:4.65 stomach:4.60 intestine:4.68 colon:4.72 liver/hepato:4.29 lung:4.34 bladder:- kidney:4.39 pituitary:4.39 thyroid/parathyroid:4.18 adrenal gland:4.57 pancreas:4.71 breast:4.15 salivary:4.29
CAGE uterus:1.04 placenta:0 prostate:0.15 ovary:0 testis:0 heart:0 muscle:0 esophagus:2.67 stomach:- intestine:0 colon:0     liver/hepato:0    lung:0 bladder:0.18 kidney:0 pituitary:0 thyroid/parathyroid:0 adrenal gland:- pancreas:0 breast:0 salivary:0
RNA-seq uterus:- placenta:- prostate:0.23 ovary:0.00 testis:0.07 heart:0 muscle:0 esophagus:- stomach:- intestine:- colon:0     liver/hepato:0        lung:0.05    bladder:- kidney:0.01 pituitary:- thyroid/parathyroid:0.12 adrenal gland:0 pancreas:- breast:0.04 salivary:-

Gene Information

IDs

Refseq ID NM_003593
Gene ID 8456
Unigene ID -
Probe set ID 207683_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000109101
GTEx ID ENSG00000109101

Orthologous Gene

Mouse[1]  NM_008238
Rat [0]  

Chromosomal Region

17q11.2  [26,850,959  -  26,865,914]
LRG_61  [5,001  -  19,217]

Gene Family (Interpro ID)

IPR001766  Transcription factor, fork head
IPR011991  Winged helix repressor DNA-binding

Link to Pubmed  (Pubmed ID)

7969402
9321431
10206641
10483588
10767081
15180707
15316080
16232301
17592270
17803914
19729838
20429426
20634891
21507891
22721479

Gene Ontology  (GO ID)

Biological Process

GO:0006952  defense response
GO:0009790  embryonic development
GO:0008544  epidermis development
GO:0050673  epithelial cell proliferation
GO:0001942  hair follicle development
GO:0030216  keratinocyte differentiation
GO:0002260  lymphocyte homeostasis
GO:0009887  organ morphogenesis
GO:0007389  pattern specification process
GO:0033081  regulation of T cell differentiation in the thymus
GO:0051090  regulation of transcription factor activity
GO:0006357  regulation of transcription from RNA polymerase II promoter
GO:0048538  thymus development
GO:0006366  transcription from RNA polymerase II promoter

Cellular Component

GO:0005634  nucleus
GO:0005667  transcription factor complex

Molecular Function

GO:0008301  DNA bending activity
GO:0003690  double-stranded DNA binding
GO:0003705  RNA polymerase II transcription factor activity, enhancer binding
GO:0043565  sequence-specific DNA binding
GO:0008134  transcription factor binding