nipsnap homolog 1 (C. elegans)

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Synonym

NIPSNAP1, Protein NipSnap1, C. elegans, nipsnap homolog 1 (C. elegans)

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:84.10 cerebellum:88.20 brain stem:- corpus callosum/glia:29.20 pineal gland:- peripheral nerve:30.70 spine:- retina:355.90 eye:152.80 artery/aorta:119.90 vein:133.30 lymphnode:80.90 peripheral blood:109.30 spleen:37.80 thymus:103.10 bone marrow:19.70 adipose:- bone:51.20 skin:62.40
GeneChip cerebrum:8.41 cerebellum:8.40 brain stem:8.60 corpus callosum/glia:7.77 pineal gland:- peripheral nerve:8.14 spine:8.01 retina:- eye:- artery/aorta:7.80 vein:7.53 lymphnode:7.95 peripheral blood:- spleen:7.86 thymus:7.81 bone marrow:7.90 adipose:7.76 bone:- skin:7.79
CAGE cerebrum:3.37 cerebellum:- brain stem:2.92 corpus callosum/glia:2.77 pineal gland:3.36 peripheral nerve:- spine:2.64 retina:- eye:- artery/aorta:2.66 vein:2.73 lymphnode:3.09 peripheral blood:- spleen:2.20 thymus:2.82 bone marrow:- adipose:1.37 bone:- skin:-
RNA-seq cerebrum:1.90 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.16 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:1.02 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:9.10 placenta:87.40 prostate:78.90 ovary:74.50 testis:26 heart:63.90 muscle:- esophagus:- stomach:21.20 intestine:64.80 colon:67.80     liver/hepato:95        lung:53.80    bladder:125.60 kidney:83.20 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:17.80 breast:74.30 salivary:-
GeneChip uterus:7.84 placenta:7.77 prostate:7.99 ovary:8.03 testis:7.58 heart:7.71 muscle:7.42 esophagus:7.89 stomach:8.03 intestine:8.16 colon:8.34 liver/hepato:10.02 lung:7.74 bladder:- kidney:9.42 pituitary:8.58 thyroid/parathyroid:8.24 adrenal gland:8.22 pancreas:8.06 breast:8.08 salivary:8.09
CAGE uterus:2.20 placenta:2.42 prostate:2.68 ovary:2.71 testis:2.43 heart:2.44 muscle:1.19 esophagus:2.81 stomach:- intestine:3.23 colon:3.27     liver/hepato:4.37    lung:2.47 bladder:1.99 kidney:3.34 pituitary:2.93 thyroid/parathyroid:2.78 adrenal gland:- pancreas:2.94 breast:2.11 salivary:2.69
RNA-seq uterus:- placenta:- prostate:1.51 ovary:2.21 testis:1.46 heart:0.79 muscle:0.00 esophagus:- stomach:- intestine:- colon:1.22     liver/hepato:3.27        lung:0.23    bladder:- kidney:1.22 pituitary:- thyroid/parathyroid:2.41 adrenal gland:1.51 pancreas:- breast:1.32 salivary:-

Gene Information

IDs

Refseq ID NM_003634
Gene ID 8508
Unigene ID Hs.173878
Probe set ID 201709_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000184117
GTEx ID ENSG00000184117

Orthologous Gene

Mouse[2]  NM_008698
Rat[1]  NM_001100730

Chromosomal Region

22q12.2  [29,950,797  -  29,977,326]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

9661659
11895482
12477932
12925885
14676191
15489334
16169070
16212417
16344560
18392847
18457437
20186120
20562859
20877624
21139048
21890473
21900206
22311985
22505724
23402259
24137763
24244333
24255178
24583282
24654937
24816145

Gene Ontology  (GO ID)

Biological Process

GO:0019233  sensory perception of pain

Cellular Component

GO:0005743  mitochondrial inner membrane
GO:0005739  mitochondrion

Molecular Function

GO:0042165  neurotransmitter binding