RuvB-like 1 (E. coli)

Synonym

TIP49a, 49 kDa TBP-interacting protein, TAP54-alpha, ECP54, RUVBL1, 54 kDa erythrocyte cytosolic protein, RVB1, RuvB-like 1, NMP238, Pontin 52, RuvB-like 1 (E. coli), TIP60-associated protein 54-alpha, Nuclear matrix protein 238, ECP-54, TIP49, RuvB (E coli homolog)-like 1, TIP49A, NMP 238

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:65.20

cerebellum:113.30

brain stem:-

corpus callosum/glia:29.20

pineal gland:-

peripheral nerve:61.30

spine:224.60

retina:355.90

eye:129.30

artery/aorta:269.80

vein:66.60

lymphnode:111.20

peripheral blood:236.80

spleen:94.50

thymus:116

bone marrow:78.70

adipose:121

bone:64

skin:81.60

GeneChip

cerebrum:5.36

cerebellum:5.15

brain stem:5.33

corpus callosum/glia:5.39

pineal gland:-

peripheral nerve:5.68

spine:5.42

retina:-

eye:-

artery/aorta:5.36

vein:5.31

lymphnode:5.68

peripheral blood:-

spleen:5.74

thymus:6.91

bone marrow:5.61

adipose:5.52

bone:-

skin:5.88

CAGE

cerebrum:2.96

cerebellum:-

brain stem:2.84

corpus callosum/glia:3.10

pineal gland:2.97

peripheral nerve:-

spine:2.70

retina:-

eye:-

artery/aorta:2.65

vein:3.34

lymphnode:3.21

peripheral blood:-

spleen:3.55

thymus:3.81

bone marrow:-

adipose:3.37

bone:-

skin:-

RNA-seq

cerebrum:2.98

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:3.57

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:3.93

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:72.90

placenta:72.90

prostate:78.90

ovary:335.40

testis:147.10

heart:89.40

muscle:40.20

esophagus:-

stomach:148.70

intestine:64.80

colon:127.20

liver/hepato:42.20

lung:117.30

bladder:125.60

kidney:166.40

pituitary:116

thyroid/parathyroid:163.70

adrenal gland:-

pancreas:62.20

breast:167.30

salivary:328.40

GeneChip

uterus:6.09

placenta:5.63

prostate:5.79

ovary:6.44

testis:6.99

heart:5.67

muscle:5.50

esophagus:5.97

stomach:5.38

intestine:5.63

colon:5.72

liver/hepato:5.24

lung:5.52

bladder:-

kidney:5.89

pituitary:5.55

thyroid/parathyroid:5.48

adrenal gland:5.33

pancreas:5.53

breast:5.91

salivary:5.08

CAGE

uterus:3.22

placenta:3.14

prostate:3.07

ovary:3.26

testis:4.07

heart:3.47

muscle:2.64

esophagus:3.27

stomach:-

intestine:2.51

colon:2.99

liver/hepato:2.96

lung:3.14

bladder:3.05

kidney:3.49

pituitary:3.21

thyroid/parathyroid:3.19

adrenal gland:-

pancreas:3.06

breast:3.02

salivary:2.95

RNA-seq

uterus:-

placenta:-

prostate:3.49

ovary:4.39

testis:4.99

heart:2.85

muscle:2.73

esophagus:-

stomach:-

intestine:-

colon:3.96

liver/hepato:3.01

lung:3.73

bladder:-

kidney:3.97

pituitary:-

thyroid/parathyroid:4.18

adrenal gland:4.36

pancreas:-

breast:3.33

salivary:-

IDs

Refseq ID	NM_003707
Gene ID	8607
Unigene ID	Hs.272822
Probe set ID	201614_s_at [HG-U133_Plus_2]
Ensembl ID	ENSG00000175792
GTEx ID	ENSG00000175792

Orthologous Gene

Mouse[1]	NM_019685
Rat [0]

Chromosomal Region

3q21.3 [127,783,625 - 127,872,757]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

IPR003593

ATPase, AAA+ type, core

Gene Ontology (GO ID)

Biological Process

GO:0051301	cell division
GO:0034080	CenH3-containing nucleosome assembly at centromere
GO:0032508	DNA duplex unwinding
GO:0006310	DNA recombination
GO:0006281	DNA repair
GO:0043968	histone H2A acetylation
GO:0043967	histone H4 acetylation
GO:0007067	mitosis
GO:0006334	nucleosome assembly
GO:0040008	regulation of growth
GO:0006357	regulation of transcription from RNA polymerase II promoter
GO:0007283	spermatogenesis
GO:0006351	transcription, DNA-dependent

Cellular Component

GO:0005737	cytoplasm
GO:0005794	Golgi apparatus
GO:0031011	Ino80 complex
GO:0043231	intracellular membrane-bounded organelle
GO:0016020	membrane
GO:0005815	microtubule organizing center
GO:0071339	MLL1 complex
GO:0035267	NuA4 histone acetyltransferase complex
GO:0016363	nuclear matrix
GO:0005730	nucleolus
GO:0005654	nucleoplasm
GO:0005634	nucleus

Molecular Function

GO:0005524	ATP binding
GO:0016887	ATPase activity
GO:0003678	DNA helicase activity
GO:0005515	protein binding

RuvB-like 1 (E. coli)

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function