LIM domain binding 1

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Synonym

CLIM-2, LDB1, CLIM2, LIM domain-binding factor CLIM2, LIM domain binding 1, NLI, LIM domain-binding protein 1, Carboxyl-terminal LIM domain-binding protein 2

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:15.40 cerebellum:12.60 brain stem:- corpus callosum/glia:29.20 pineal gland:- peripheral nerve:- spine:- retina:- eye:23.50 artery/aorta:30 vein:- lymphnode:101.10 peripheral blood:- spleen:- thymus:38.70 bone marrow:118.10 adipose:- bone:12.80 skin:33.60
GeneChip cerebrum:6.53 cerebellum:6.10 brain stem:6.62 corpus callosum/glia:6.27 pineal gland:- peripheral nerve:6.17 spine:6.02 retina:- eye:- artery/aorta:6.29 vein:6.60 lymphnode:7.01 peripheral blood:- spleen:7.16 thymus:6.44 bone marrow:6.98 adipose:6.61 bone:- skin:6.86
CAGE cerebrum:4.31 cerebellum:- brain stem:4.12 corpus callosum/glia:4.38 pineal gland:4.06 peripheral nerve:- spine:3.96 retina:- eye:- artery/aorta:4.42 vein:4.24 lymphnode:4.25 peripheral blood:- spleen:3.98 thymus:4.21 bone marrow:- adipose:3.49 bone:- skin:-
RNA-seq cerebrum:3.57 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:4.64 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:3.69 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:45.60 placenta:10.90 prostate:11.30 ovary:- testis:34.60 heart:89.40 muscle:- esophagus:- stomach:21.20 intestine:- colon:25.40     liver/hepato:-        lung:24.40    bladder:- kidney:10.40 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:35.60 breast:37.20 salivary:-
GeneChip uterus:6.72 placenta:7.06 prostate:6.62 ovary:6.80 testis:6.57 heart:6.77 muscle:6.49 esophagus:6.97 stomach:6.73 intestine:6.35 colon:6.67 liver/hepato:6.48 lung:6.39 bladder:- kidney:6.78 pituitary:6.75 thyroid/parathyroid:6.67 adrenal gland:6.71 pancreas:6.56 breast:6.86 salivary:6.87
CAGE uterus:4.48 placenta:3.92 prostate:4.37 ovary:4.28 testis:3.96 heart:3.83 muscle:3.69 esophagus:3.96 stomach:- intestine:3.55 colon:4.00     liver/hepato:3.02    lung:3.98 bladder:4.08 kidney:3.78 pituitary:3.66 thyroid/parathyroid:3.98 adrenal gland:- pancreas:3.52 breast:3.62 salivary:4.54
RNA-seq uterus:- placenta:- prostate:5.11 ovary:4.96 testis:4.32 heart:3.35 muscle:3.21 esophagus:- stomach:- intestine:- colon:4.48     liver/hepato:1.71        lung:4.08    bladder:- kidney:3.69 pituitary:- thyroid/parathyroid:4.55 adrenal gland:4.26 pancreas:- breast:3.40 salivary:-

Gene Ontology  (GO ID)

Biological Process

GO:0009948  anterior/posterior axis specification
GO:0022607  cellular component assembly
GO:0021702  cerebellar Purkinje cell differentiation
GO:0010669  epithelial structure maintenance
GO:0001702  gastrulation with mouth forming second
GO:0001942  hair follicle development
GO:0060322  head development
GO:0043973  histone H3-K4 acetylation
GO:0007275  multicellular organismal development
GO:0045647  negative regulation of erythrocyte differentiation
GO:0045892  negative regulation of transcription, DNA-dependent
GO:0030182  neuron differentiation
GO:0045785  positive regulation of cell adhesion
GO:0046985  positive regulation of hemoglobin biosynthetic process
GO:0045944  positive regulation of transcription from RNA polymerase II promoter
GO:0032784  regulation of RNA elongation
GO:0006355  regulation of transcription, DNA-dependent
GO:0035019  somatic stem cell maintenance
GO:0006366  transcription from RNA polymerase II promoter
GO:0006351  transcription, DNA-dependent
GO:0000972  transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery
GO:0016055  Wnt receptor signaling pathway

Cellular Component

GO:0005911  cell-cell junction
GO:0000790  nuclear chromatin
GO:0005634  nucleus
GO:0043234  protein complex
GO:0005667  transcription factor complex

Molecular Function

GO:0003682  chromatin binding
GO:0019899  enzyme binding
GO:0030274  LIM domain binding
GO:0042803  protein homodimerization activity
GO:0043621  protein self-association
GO:0003714  transcription corepressor activity