sorting nexin family member 21

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Synonym

dJ337O18.4, sorting nexin family member 21, PP3993, Sorting nexin-21, chromosome 20 open reading frame 161, Sorting nexin L, SNX-L, C20orf161, SNX21, SNXL, MGC29895

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:27.30 cerebellum:25.20 brain stem:- corpus callosum/glia:- pineal gland:296.70 peripheral nerve:30.70 spine:224.60 retina:- eye:76.40 artery/aorta:30 vein:66.60 lymphnode:10.10 peripheral blood:18.20 spleen:- thymus:12.90 bone marrow:- adipose:- bone:51.20 skin:19.20
GeneChip nodata
CAGE cerebrum:3.25 cerebellum:- brain stem:3.02 corpus callosum/glia:3.14 pineal gland:3.50 peripheral nerve:- spine:3.14 retina:- eye:- artery/aorta:3.70 vein:3.31 lymphnode:2.13 peripheral blood:- spleen:2.42 thymus:1.01 bone marrow:- adipose:3.36 bone:- skin:-
RNA-seq cerebrum:0.54 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.00 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.67 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:27.30 placenta:14.60 prostate:22.50 ovary:74.50 testis:13 heart:38.30 muscle:40.20 esophagus:- stomach:63.70 intestine:- colon:25.40     liver/hepato:21.10        lung:24.40    bladder:- kidney:31.20 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:35.60 breast:18.60 salivary:-
GeneChip nodata
CAGE uterus:3.85 placenta:2.65 prostate:3.55 ovary:3.78 testis:2.90 heart:3.19 muscle:3.65 esophagus:3.31 stomach:- intestine:2.44 colon:3.13     liver/hepato:2.08    lung:2.98 bladder:3.50 kidney:2.78 pituitary:2.62 thyroid/parathyroid:2.70 adrenal gland:- pancreas:1.74 breast:3.47 salivary:3.03
RNA-seq uterus:- placenta:- prostate:0.00 ovary:0.00 testis:0.00 heart:0.00 muscle:0.00 esophagus:- stomach:- intestine:- colon:0.00     liver/hepato:0.20        lung:0.00    bladder:- kidney:0.00 pituitary:- thyroid/parathyroid:1.36 adrenal gland:0.00 pancreas:- breast:2.35 salivary:-

Gene Information

IDs

Refseq ID NM_001042633
Gene ID 90203
Unigene ID Hs.472854
Probe set ID -
Ensembl ID ENSG00000124104
GTEx ID ENSG00000124104

Orthologous Gene

Mouse[2]  NM_133924
Rat[2]  NM_133924

Chromosomal Region

20q13.12  [44,462,449  -  44,471,914]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

11485546
11736640
11780052
12459172
12461558
12477932
14702039
16344560
21832049
21988832

Gene Ontology  (GO ID)

Biological Process

GO:0007154  cell communication
GO:0015031  protein transport

Cellular Component

GO:0030659  cytoplasmic vesicle membrane

Molecular Function

GO:0035091  phosphoinositide binding