H2A histone family, member Y

Synonym

H2A/y, H2A.y, Medulloblastoma antigen MU-MB-50.205, H2AF12M, Core histone macro-H2A.1, mH2A1, macroH2A1.2, Histone macroH2A1, H2AFJ, H2AFY, MACROH2A1.1, H2A histone family, member Y, MACROH2A1

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:98.40

cerebellum:151.10

brain stem:-

corpus callosum/glia:58.30

pineal gland:148.30

peripheral nerve:153.40

spine:224.60

retina:-

eye:111.70

artery/aorta:30

vein:266.60

lymphnode:374.10

peripheral blood:273.30

spleen:170.20

thymus:193.30

bone marrow:511.70

adipose:121

bone:102.40

skin:105.60

GeneChip

cerebrum:8.62

cerebellum:9.04

brain stem:8.81

corpus callosum/glia:8.45

pineal gland:-

peripheral nerve:8.30

spine:8.55

retina:-

eye:-

artery/aorta:8.48

vein:8.28

lymphnode:9.22

peripheral blood:-

spleen:9.13

thymus:10.34

bone marrow:10.12

adipose:8.77

bone:-

skin:9.46

CAGE

cerebrum:3.82

cerebellum:-

brain stem:3.85

corpus callosum/glia:3.86

pineal gland:4.96

peripheral nerve:-

spine:3.47

retina:-

eye:-

artery/aorta:3.74

vein:4.26

lymphnode:4.46

peripheral blood:-

spleen:4.32

thymus:4.96

bone marrow:-

adipose:4.44

bone:-

skin:-

RNA-seq

cerebrum:2.71

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:1.82

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:5.17

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:118.50

placenta:182.20

prostate:90.10

ovary:260.80

testis:82.20

heart:140.50

muscle:60.30

esophagus:342.80

stomach:127.50

intestine:129.60

colon:212

liver/hepato:84.40

lung:200.40

bladder:-

kidney:83.20

pituitary:1159.80

thyroid/parathyroid:-

adrenal gland:203.10

pancreas:160

breast:167.30

salivary:-

GeneChip

uterus:9.02

placenta:8.71

prostate:9.32

ovary:9

testis:8.33

heart:8.47

muscle:8.65

esophagus:9.77

stomach:8.88

intestine:9.07

colon:9.39

liver/hepato:8.04

lung:9.28

bladder:-

kidney:8.68

pituitary:9.06

thyroid/parathyroid:8.78

adrenal gland:8.67

pancreas:7.97

breast:9.13

salivary:8.41

CAGE

uterus:4.00

placenta:4.17

prostate:3.94

ovary:3.92

testis:4.23

heart:4.11

muscle:4.03

esophagus:4.64

stomach:-

intestine:4.76

colon:4.52

liver/hepato:3.85

lung:4.48

bladder:3.84

kidney:3.95

pituitary:4.05

thyroid/parathyroid:3.86

adrenal gland:-

pancreas:3.59

breast:3.81

salivary:4.03

RNA-seq

uterus:-

placenta:-

prostate:2.31

ovary:4.92

testis:3.70

heart:1.63

muscle:1.21

esophagus:-

stomach:-

intestine:-

colon:4.27

liver/hepato:2.20

lung:4.05

bladder:-

kidney:3.59

pituitary:-

thyroid/parathyroid:5.13

adrenal gland:4.97

pancreas:-

breast:4.21

salivary:-

IDs

Refseq ID	NM_001040158
Gene ID	9555
Unigene ID	Hs.420272
Probe set ID	207168_s_at [HG-U133_Plus_2]
Ensembl ID	ENSG00000113648
GTEx ID	ENSG00000113648

Orthologous Gene

Mouse[3]	NM_001159513, NM_001159514, NM_001159515, NM_012015
Rat [0]

Chromosomal Region

5q31.1 [134,669,590 - 134,735,604]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

GO:0016568	chromatin modification
GO:0007549	dosage compensation
GO:0006334	nucleosome assembly

Cellular Component

GO:0001740	Barr body
GO:0000793	condensed chromosome
GO:0000786	nucleosome

Molecular Function

GO:0003682	chromatin binding
GO:0003677	DNA binding
GO:0005515	protein binding
GO:0046982	protein heterodimerization activity

H2A histone family, member Y

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function