caldesmon 1

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Synonym

Cald1, C920027I18Rik, AI195384, caldesmon 1, AW536160, AV071549, MGC30319, 4833423D12Rik

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:74.70 cerebellum:18.40 brain stem:- corpus callosum/glia:- pineal gland:515.60 peripheral nerve:114.70 spine:47.30 retina:32.10 eye:212.80 artery/aorta:- vein:- lymphnode:21.60 peripheral blood:- spleen:26.30 thymus:19.80 bone marrow:25.60 adipose:- bone:87.70 skin:261.30
GeneChip cerebrum:8.02 cerebellum:8.49 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:9.07 spine:8.01 retina:9.63 eye:10.49 artery/aorta:- vein:13.10 lymphnode:9.71 peripheral blood:- spleen:10.39 thymus:- bone marrow:9.71 adipose:10.29 bone:10.50 skin:9.95
CAGE cerebrum:4.00 cerebellum:- brain stem:3.74 corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:3.72 retina:- eye:- artery/aorta:6.37 vein:- lymphnode:5.09 peripheral blood:- spleen:4.15 thymus:2.86 bone marrow:- adipose:- bone:4.08 skin:5.66
RNA-seq cerebrum:3.04 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:523.50 placenta:124.30 prostate:308.80 ovary:57.50 testis:243.90 heart:130.20 muscle:142 esophagus:- stomach:196.40 intestine:- colon:70.50     liver/hepato:153.90        lung:180.80    bladder:198.50 kidney:177.30 pituitary:116.30 thyroid/parathyroid:- adrenal gland:- pancreas:103.20 breast:244.90 salivary:108
GeneChip uterus:12.17 placenta:11.75 prostate:11.03 ovary:11.80 testis:7.35 heart:10.21 muscle:9.57 esophagus:- stomach:11.43 intestine:11 colon:- liver/hepato:11.66 lung:11.47 bladder:13.59 kidney:9.47 pituitary:9.92 thyroid/parathyroid:- adrenal gland:10.67 pancreas:9.53 breast:10.73 salivary:12.04
CAGE uterus:6.09 placenta:5.74 prostate:5.51 ovary:5.73 testis:2.60 heart:- muscle:- esophagus:- stomach:5.79 intestine:4.50 colon:4.63     liver/hepato:5.32    lung:5.20 bladder:7.47 kidney:- pituitary:4.20 thyroid/parathyroid:- adrenal gland:4.57 pancreas:4.76 breast:4.84 salivary:-
RNA-seq uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:3.25 esophagus:- stomach:- intestine:- colon:-     liver/hepato:17.97        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-

Gene Information

IDs

Refseq ID NM_145575
Gene ID 109624
Unigene ID Mm.308134
Probe set ID 1424769_s_at  [Mouse430_2]
Ensembl ID ENSMUSG00000029761

Orthologous Gene

Human[21]  NM_004342, NM_033138, NM_033139, NM_033140, NM_033157
Rat [0]  

Chromosomal Region

-

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

2909534
8211130
8889548
9172305
10349636
10373225
10615402
10922068
11042159
11076861
11217851
12466851
12477932
14610273
15548578
15823561
16115893
16141072
16141073
16183868
16466398
18554416
18973680
19015276
19349302
19690389
19875849
20412781
20833366
21350330
21565611
21677750
22043022
23149489
23341629
23986516
24046453
24614889

Gene Ontology  (GO ID)

Biological Process

GO:0006940  regulation of smooth muscle contraction

Cellular Component

GO:0030478  actin cap
GO:0016020  membrane

Molecular Function

GO:0003779  actin binding