chromobox homolog 5 (Drosophila HP1a)

Synonym

2610029O15Rik, HP1a, C75991, Cbx5, HP1 alpha, Hp1a, Chromobox protein homolog 5, Heterochromatin protein 1 homolog alpha, HP1, heterochromatin protein 1 alpha, chromobox homolog 5 (Drosophila HP1a)

normal 40 tissues
developmental tissues and primary cells（FANTOM5 CAGE）

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:373.40

cerebellum:110.50

brain stem:190.70

corpus callosum/glia:-

pineal gland:-

peripheral nerve:114.70

spine:-

retina:385.70

eye:326.70

artery/aorta:84.40

vein:-

lymphnode:129.60

peripheral blood:71.90

spleen:118.50

thymus:197.60

bone marrow:-

adipose:-

bone:150.30

skin:102.90

GeneChip

cerebrum:9.98

cerebellum:9.42

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:8.96

spine:9.84

retina:8.09

eye:7.63

artery/aorta:-

vein:9.52

lymphnode:8.65

peripheral blood:-

spleen:8.90

thymus:-

bone marrow:10.32

adipose:9.04

bone:10.07

skin:8.34

CAGE

cerebrum:4.43

cerebellum:-

brain stem:4.55

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:4.52

retina:-

eye:-

artery/aorta:4.01

vein:-

lymphnode:3.97

peripheral blood:-

spleen:4.39

thymus:4.24

bone marrow:-

adipose:-

bone:4.71

skin:3.84

RNA-seq

cerebrum:3.59

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:-

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:-

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:174.50

placenta:13.80

prostate:154.40

ovary:46

testis:147.80

heart:55.80

muscle:71

esophagus:-

stomach:196.40

intestine:147.90

colon:35.20

liver/hepato:81.50

lung:80.30

bladder:66.20

kidney:32.20

pituitary:219.60

thyroid/parathyroid:-

adrenal gland:-

pancreas:178.30

breast:104.50

salivary:-

GeneChip

uterus:9.44

placenta:8.30

prostate:8.60

ovary:9.44

testis:8.67

heart:8.56

muscle:8.47

esophagus:-

stomach:8.74

intestine:9.10

colon:-

liver/hepato:7.59

lung:9.25

bladder:8.52

kidney:9.08

pituitary:10.36

thyroid/parathyroid:-

adrenal gland:8.91

pancreas:8.45

breast:8.62

salivary:7.73

CAGE

uterus:3.87

placenta:3.61

prostate:3.02

ovary:4.05

testis:4.31

heart:-

muscle:-

esophagus:-

stomach:2.95

intestine:3.55

colon:3.41

liver/hepato:3.11

lung:4.02

bladder:3.55

kidney:-

pituitary:4.51

thyroid/parathyroid:-

adrenal gland:3.67

pancreas:3.71

breast:3.60

salivary:-

RNA-seq

uterus:-

placenta:-

prostate:-

ovary:-

testis:-

heart:-

muscle:2.37

esophagus:-

stomach:-

intestine:-

colon:-

liver/hepato:2.13

lung:-

bladder:-

kidney:-

pituitary:-

thyroid/parathyroid:-

adrenal gland:-

pancreas:-

breast:-

salivary:-

IDs

Refseq ID	NM_001110216
Gene ID	12419
Unigene ID	Mm.262059
Probe set ID	1454636_at [Mouse430_2]
Ensembl ID	ENSMUSG00000009575

Orthologous Gene

Human[6]	NM_001127321, NM_001127322, NM_012117
Rat[1]	NM_001106797, NM_001127322, NM_012117

Chromosomal Region

15F3 [103,021,975 - 103,070,247]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

IPR000953	Chromo domain
IPR017984	Chromo domain subgroup
IPR016197	Chromo domain-like
IPR008251	Chromo shadow
IPR018125	Chromo shadow, subgroup

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

GO:0045892

negative regulation of transcription, DNA-dependent

Cellular Component

GO:0010369	chromocenter
GO:0005694	chromosome
GO:0000775	chromosome, centromeric region
GO:0005737	cytoplasm
GO:0000792	heterochromatin
GO:0000118	histone deacetylase complex
GO:0035097	histone methyltransferase complex
GO:0000776	kinetochore
GO:0005720	nuclear heterochromatin
GO:0005730	nucleolus
GO:0005634	nucleus
GO:0016605	PML body
GO:0017053	transcriptional repressor complex

Molecular Function

GO:0003682	chromatin binding
GO:0019899	enzyme binding
GO:0042826	histone deacetylase binding
GO:0035064	methylated histone residue binding
GO:0005515	protein binding
GO:0030674	protein binding, bridging
GO:0042803	protein homodimerization activity
GO:0070491	transcription repressor binding

chromobox homolog 5 (Drosophila HP1a)

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function