caudal type homeobox 2

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Synonym

Cdx2, Caudal-type homeobox protein 2, Cdx-2, Homeobox protein CDX-2, caudal type homeo box 2

normal 40 tissues
developmental tissues and primary cells（FANTOM5 CAGE）

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

nodata

GeneChip

cerebrum:4.75

cerebellum:4.81

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:4.71

spine:4.98

retina:4.55

eye:4.90

artery/aorta:-

vein:4.63

lymphnode:4.58

peripheral blood:-

spleen:4.76

thymus:-

bone marrow:4.61

adipose:4.86

bone:4.66

skin:4.80

CAGE

cerebrum:0

cerebellum:-

brain stem:0

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:0

retina:-

eye:-

artery/aorta:0

vein:-

lymphnode:0

peripheral blood:-

spleen:0

thymus:0

bone marrow:-

adipose:-

bone:0

skin:0

RNA-seq

cerebrum:1.09

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:-

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:-

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

nodata

GeneChip

uterus:4.76

placenta:6.37

prostate:4.88

ovary:4.48

testis:4.85

heart:4.96

muscle:5.19

esophagus:-

stomach:6.73

intestine:8.11

colon:-

liver/hepato:4.95

lung:4.84

bladder:4.59

kidney:4.58

pituitary:4.85

thyroid/parathyroid:-

adrenal gland:4.76

pancreas:5.13

breast:4.75

salivary:5.03

CAGE

uterus:0

placenta:3.50

prostate:0

ovary:0.13

testis:0

heart:-

muscle:-

esophagus:-

stomach:1.07

intestine:5.25

colon:5.52

liver/hepato:0

lung:0

bladder:0

kidney:-

pituitary:0

thyroid/parathyroid:-

adrenal gland:0

pancreas:0

breast:0

salivary:-

RNA-seq

uterus:-

placenta:-

prostate:-

ovary:-

testis:-

heart:-

muscle:0.68

esophagus:-

stomach:-

intestine:-

colon:-

liver/hepato:0

lung:-

bladder:-

kidney:-

pituitary:-

thyroid/parathyroid:-

adrenal gland:-

pancreas:-

breast:-

salivary:-

IDs

Refseq ID	NM_007673
Gene ID	12591
Unigene ID	-
Probe set ID	1422074_at [Mouse430_2]
Ensembl ID	ENSMUSG00000029646

Orthologous Gene

Human[1]	NM_001265
Rat[1]	NM_023963

Chromosomal Region

Gene Family (Interpro ID)

IPR001356	Homeobox
IPR009057	Homeodomain-like
IPR012287	Homeodomain-related

Gene Ontology (GO ID)

Biological Process

GO:0009952	anterior/posterior pattern formation
GO:0001824	blastocyst development
GO:0001568	blood vessel development
GO:0030154	cell differentiation
GO:0008333	endosome to lysosome transport
GO:0045197	establishment or maintenance of epithelial cell apical/basal polarity
GO:0060711	labyrinthine layer development
GO:0007275	multicellular organismal development
GO:0000122	negative regulation of transcription from RNA polymerase II promoter
GO:0007389	pattern specification process
GO:0001890	placenta development
GO:0045597	positive regulation of cell differentiation
GO:0008284	positive regulation of cell proliferation
GO:0045893	positive regulation of transcription, DNA-dependent
GO:0006357	regulation of transcription from RNA polymerase II promoter
GO:0006355	regulation of transcription, DNA-dependent
GO:0035019	somatic stem cell maintenance
GO:0006351	transcription, DNA-dependent
GO:0001829	trophectodermal cell differentiation

Cellular Component

GO:0000794	condensed nuclear chromosome
GO:0005634	nucleus
GO:0043234	protein complex
GO:0017053	transcriptional repressor complex

Molecular Function

GO:0003677	DNA binding
GO:0003690	double-stranded DNA binding
GO:0005515	protein binding
GO:0043565	sequence-specific DNA binding
GO:0003714	transcription corepressor activity
GO:0003700	transcription factor activity

caudal type homeobox 2

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function