Hermansky-Pudlak syndrome 3 homolog (human)

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Synonym

Hermansky-Pudlak syndrome 3 protein homolog, Coa, Hps3, Cocoa protein, Hermansky-Pudlak syndrome 3 homolog (human), coa

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:19.10 cerebellum:128.90 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:57.30 spine:94.60 retina:96.40 eye:30.40 artery/aorta:84.40 vein:- lymphnode:442.90 peripheral blood:14.40 spleen:131.70 thymus:227.20 bone marrow:153.90 adipose:- bone:50.10 skin:55.40
GeneChip cerebrum:7.02 cerebellum:7.32 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:9.12 spine:7.60 retina:8.28 eye:7.42 artery/aorta:- vein:6.84 lymphnode:9.77 peripheral blood:- spleen:9.83 thymus:- bone marrow:8.99 adipose:7.72 bone:8.90 skin:7.28
CAGE cerebrum:3.14 cerebellum:- brain stem:3.16 corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:3.44 retina:- eye:- artery/aorta:3.12 vein:- lymphnode:4.64 peripheral blood:- spleen:3.46 thymus:3.28 bone marrow:- adipose:- bone:3.89 skin:3.36
RNA-seq cerebrum:1.32 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:43.60 placenta:27.60 prostate:30.90 ovary:46 testis:44.30 heart:- muscle:- esophagus:- stomach:- intestine:- colon:17.60     liver/hepato:9.10        lung:110.50    bladder:- kidney:8.10 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:46.90 breast:32.60 salivary:-
GeneChip uterus:7.28 placenta:7.18 prostate:7.47 ovary:7.42 testis:5.98 heart:7.28 muscle:6.78 esophagus:- stomach:6.85 intestine:7.03 colon:- liver/hepato:6.88 lung:7.94 bladder:7.25 kidney:8.78 pituitary:7.16 thyroid/parathyroid:- adrenal gland:7.70 pancreas:7.63 breast:7.42 salivary:6.97
CAGE uterus:2.76 placenta:2.75 prostate:2.69 ovary:2.97 testis:2.25 heart:- muscle:- esophagus:- stomach:2.52 intestine:2.40 colon:2.48     liver/hepato:2.46    lung:3.36 bladder:2.90 kidney:- pituitary:2.85 thyroid/parathyroid:- adrenal gland:2.93 pancreas:2.97 breast:2.83 salivary:-
RNA-seq uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:1.45 esophagus:- stomach:- intestine:- colon:-     liver/hepato:2.24        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-

Gene Information

IDs

Refseq ID NM_080634
Gene ID 12807
Unigene ID Mm.291533
Probe set ID 1450647_at  [Mouse430_2]
Ensembl ID ENSMUSG00000027615

Orthologous Gene

Human[1]  NM_032383
Rat[1]  NM_032383

Chromosomal Region

3A2  [19,895,945  -  19,935,315]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

1686722
2379821
3408670
9714600
10193444
10349636
11042159
11076861
11217851
11592818
11707070
12445206
12466851
12477932
14718540
15306695
15489334
15782199
16141072
16141073
16249233
16760431
18629000
18715234
19000842
19010779
21677750
22984402

Gene Ontology  (GO ID)

Biological Process

GO:0006996  organelle organization
GO:0043473  pigmentation

Cellular Component

GO:0005737  cytoplasm