versican

Synonym

9430051N09, hdf, heart defect, PG-M(V1), chondroitin sulfate proteoglycan 2, Chondroitin sulfate proteoglycan core protein 2, Cspg2, 5430420N07Rik, versican, PG-M, Large fibroblast proteoglycan, Versican core protein precursor, PG-M(V0)

normal 40 tissues
developmental tissues and primary cells（FANTOM5 CAGE）

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:86.80

cerebellum:147.40

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:19.10

spine:94.60

retina:32.10

eye:106.40

artery/aorta:843.90

vein:-

lymphnode:-

peripheral blood:-

spleen:39.50

thymus:39.50

bone marrow:-

adipose:-

bone:50.10

skin:47.50

GeneChip

cerebrum:5.86

cerebellum:5.77

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:5.12

spine:5.95

retina:4.72

eye:6.60

artery/aorta:-

vein:9.83

lymphnode:4.96

peripheral blood:-

spleen:4.59

thymus:-

bone marrow:4.70

adipose:6.11

bone:6.29

skin:5.40

CAGE

cerebrum:2.33

cerebellum:-

brain stem:2.69

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:2.54

retina:-

eye:-

artery/aorta:3.08

vein:-

lymphnode:2.38

peripheral blood:-

spleen:1.97

thymus:0

bone marrow:-

adipose:-

bone:1.69

skin:3.50

RNA-seq

cerebrum:1.24

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:-

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:-

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:392.60

placenta:-

prostate:154.40

ovary:57.50

testis:22.20

heart:37.20

muscle:-

esophagus:-

stomach:-

intestine:-

colon:-

liver/hepato:36.20

lung:170.70

bladder:132.40

kidney:-

pituitary:12.90

thyroid/parathyroid:-

adrenal gland:-

pancreas:18.80

breast:39.20

salivary:-

GeneChip

uterus:7.76

placenta:7.53

prostate:6.67

ovary:8.57

testis:4.11

heart:6.17

muscle:5.87

esophagus:-

stomach:5.89

intestine:5.28

colon:-

liver/hepato:3.90

lung:5.05

bladder:8.58

kidney:3.97

pituitary:4.38

thyroid/parathyroid:-

adrenal gland:4.37

pancreas:4.51

breast:6.51

salivary:5.79

CAGE

uterus:3.53

placenta:2.88

prostate:2.45

ovary:3.98

testis:0.45

heart:-

muscle:-

esophagus:-

stomach:1.07

intestine:1.49

colon:1.46

liver/hepato:0

lung:2.40

bladder:3.73

kidney:-

pituitary:0.86

thyroid/parathyroid:-

adrenal gland:0.64

pancreas:1.84

breast:2.22

salivary:-

RNA-seq

uterus:-

placenta:-

prostate:-

ovary:-

testis:-

heart:-

muscle:1.32

esophagus:-

stomach:-

intestine:-

colon:-

liver/hepato:0

lung:-

bladder:-

kidney:-

pituitary:-

thyroid/parathyroid:-

adrenal gland:-

pancreas:-

breast:-

salivary:-

IDs

Refseq ID	NM_019389
Gene ID	13003
Unigene ID	Mm.158700
Probe set ID	1427256_at [Mouse430_2]
Ensembl ID	ENSMUSG00000021614

Orthologous Gene

Human[34]	NM_001126336, NM_001164097, NM_001164098, NM_004385
Rat [0]

Chromosomal Region

13C3 [89,794,915 - 89,882,117]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

IPR001304	C-type lectin
IPR016187	C-type lectin fold
IPR016186	C-type lectin-like
IPR001881	EGF-like calcium-binding
IPR000742	EGF-like, type 3
IPR013106	Immunoglobulin V-set
IPR003596	Immunoglobulin V-set, subgroup
IPR000538	Link
IPR000436	Sushi/SCR/CCP

Gene Ontology (GO ID)

Biological Process

GO:0007155	cell adhesion
GO:0008347	glial cell migration
GO:0007507	heart development

Cellular Component

GO:0031012	extracellular matrix
GO:0005576	extracellular region
GO:0005615	extracellular space
GO:0005578	proteinaceous extracellular matrix

Molecular Function

GO:0005509	calcium ion binding
GO:0030246	carbohydrate binding
GO:0005540	hyaluronic acid binding

versican

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function