LIM homeobox protein 2

jump to detail

Synonym

LIM homeobox protein 2, Lh-2, Lhx2, apterous, LH2A, ap, LIM/homeobox protein Lhx2

normal 40 tissues
developmental tissues and primary cells（FANTOM5 CAGE）

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:90.30

cerebellum:-

brain stem:127.10

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:160.70

eye:53.20

artery/aorta:-

vein:-

lymphnode:-

peripheral blood:14.40

spleen:-

thymus:-

bone marrow:-

adipose:-

bone:25

skin:31.70

GeneChip

cerebrum:8.20

cerebellum:3.93

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:3.82

spine:4.03

retina:7.52

eye:6.39

artery/aorta:-

vein:4.40

lymphnode:4

peripheral blood:-

spleen:3.97

thymus:-

bone marrow:4.11

adipose:4.11

bone:3.89

skin:9.36

CAGE

cerebrum:2.27

cerebellum:-

brain stem:1.84

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:0.32

retina:-

eye:-

artery/aorta:0

vein:-

lymphnode:0.83

peripheral blood:-

spleen:0

thymus:0.49

bone marrow:-

adipose:-

bone:0.63

skin:4.43

RNA-seq

cerebrum:9.90

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:-

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:-

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:-

placenta:13.80

prostate:-

ovary:11.50

testis:36.90

heart:-

muscle:-

esophagus:-

stomach:-

intestine:-

colon:-

liver/hepato:-

lung:-

bladder:-

kidney:-

pituitary:25.80

thyroid/parathyroid:-

adrenal gland:-

pancreas:-

breast:13.10

salivary:54

GeneChip

uterus:3.87

placenta:7.52

prostate:3.87

ovary:3.89

testis:6.11

heart:4.04

muscle:4.27

esophagus:-

stomach:3.75

intestine:3.86

colon:-

liver/hepato:4.92

lung:3.99

bladder:3.98

kidney:3.98

pituitary:4.90

thyroid/parathyroid:-

adrenal gland:4.09

pancreas:5.39

breast:3.95

salivary:3.78

CAGE

uterus:0

placenta:2.28

prostate:0

ovary:0

testis:0.75

heart:-

muscle:-

esophagus:-

stomach:0.67

intestine:0

colon:0

liver/hepato:2.02

lung:0

bladder:0

kidney:-

pituitary:1.11

thyroid/parathyroid:-

adrenal gland:0

pancreas:0

breast:0.20

salivary:-

RNA-seq

uterus:-

placenta:-

prostate:-

ovary:-

testis:-

heart:-

muscle:-

esophagus:-

stomach:-

intestine:-

colon:-

liver/hepato:2.31

lung:-

bladder:-

kidney:-

pituitary:-

thyroid/parathyroid:-

adrenal gland:-

pancreas:-

breast:-

salivary:-

IDs

Refseq ID	NM_010710
Gene ID	16870
Unigene ID	Mm.142856
Probe set ID	1418317_at [Mouse430_2]
Ensembl ID	ENSMUSG00000000247

Orthologous Gene

Human[2]	NM_004789
Rat[1]	NM_001106571

Chromosomal Region

Gene Family (Interpro ID)

IPR001356	Homeobox
IPR009057	Homeodomain-like
IPR012287	Homeodomain-related

Gene Ontology (GO ID)

Biological Process

GO:0048646	anatomical structure formation involved in morphogenesis
GO:0007411	axon guidance
GO:0007420	brain development
GO:0021987	cerebral cortex development
GO:0009953	dorsal/ventral pattern formation
GO:0007498	mesoderm development
GO:0007399	nervous system development
GO:0001843	neural tube closure
GO:0022008	neurogenesis
GO:0030182	neuron differentiation
GO:0021772	olfactory bulb development
GO:0045944	positive regulation of transcription from RNA polymerase II promoter
GO:0045893	positive regulation of transcription, DNA-dependent
GO:0006355	regulation of transcription, DNA-dependent
GO:0021537	telencephalon development
GO:0021978	telencephalon regionalization
GO:0006351	transcription, DNA-dependent

Cellular Component

GO:0005622	intracellular
GO:0005634	nucleus

Molecular Function

GO:0003677	DNA binding
GO:0046872	metal ion binding
GO:0005515	protein binding
GO:0043565	sequence-specific DNA binding
GO:0003700	transcription factor activity
GO:0008270	zinc ion binding

LIM homeobox protein 2

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function