CD209d antigen

 jump to detail

Synonym

DC-SIGNR3, DC-SIGN-related protein 3, mSIGNR3, CD209 antigen-like protein D, Cd209d, SIGN-R3, CD209d antigen, SIGNR3

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:- cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
GeneChip cerebrum:4.77 cerebellum:4.87 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:4.68 spine:4.88 retina:4.99 eye:4.99 artery/aorta:- vein:4.79 lymphnode:7.85 peripheral blood:- spleen:5.60 thymus:- bone marrow:5.42 adipose:6.01 bone:5.46 skin:5.52
CAGE cerebrum:0 cerebellum:- brain stem:0 corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:0 retina:- eye:- artery/aorta:1.15 vein:- lymphnode:2.82 peripheral blood:- spleen:0.41 thymus:0.67 bone marrow:- adipose:- bone:0 skin:2.31
RNA-seq cerebrum:0.80 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:- esophagus:- stomach:- intestine:- colon:17.60     liver/hepato:-        lung:-    bladder:66.20 kidney:- pituitary:12.90 thyroid/parathyroid:- adrenal gland:- pancreas:9.40 breast:19.60 salivary:-
GeneChip uterus:4.81 placenta:4.83 prostate:5.11 ovary:4.72 testis:5.10 heart:5.11 muscle:5.87 esophagus:- stomach:5.07 intestine:4.81 colon:- liver/hepato:5.09 lung:4.76 bladder:5.19 kidney:5.12 pituitary:5.03 thyroid/parathyroid:- adrenal gland:4.68 pancreas:5.11 breast:5.66 salivary:5.10
CAGE uterus:0 placenta:0 prostate:0.51 ovary:0.13 testis:0 heart:- muscle:- esophagus:- stomach:0.67 intestine:0 colon:0     liver/hepato:0.26    lung:0 bladder:1.26 kidney:- pituitary:0 thyroid/parathyroid:- adrenal gland:0.14 pancreas:0 breast:1.28 salivary:-
RNA-seq uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:1.24 esophagus:- stomach:- intestine:- colon:-     liver/hepato:0        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-

Gene Information

IDs

Refseq ID NM_130904
Gene ID 170779
Unigene ID Mm.111026
Probe set ID 1426183_a_at  [Mouse430_2]
Ensembl ID ENSMUSG00000031495

Orthologous Gene

Human[28]  NM_001144893, NM_001144894, NM_001144895, NM_001144896, NM_001144897, NM_001144899, NM_021155, NM_001144904, NM_001144905, NM_001144907, NM_001144909, NM_001144910, NM_001144911, NM_014257
Rat [0]  

Chromosomal Region

-

Gene Family (Interpro ID)

IPR001304  C-type lectin
IPR016187  C-type lectin fold
IPR016186  C-type lectin-like

Link to Pubmed  (Pubmed ID)

10349636
11042159
11076861
11217851
11581173
12466851
15136555
15588578
16141072
16141073
16682406
19770268
20724666
21267068
21677750
23684988

Gene Ontology  (GO ID)

Biological Process

GO:0042742  defense response to bacterium
GO:0006897  endocytosis
GO:0050715  positive regulation of cytokine secretion

Cellular Component

GO:0016021  integral to membrane
GO:0016020  membrane

Molecular Function

GO:0030246  carbohydrate binding
GO:0005537  mannose binding
GO:0046872  metal ion binding
GO:0042803  protein homodimerization activity