C-type lectin domain family 4, member d

 jump to detail

Synonym

MGC117678, C-type lectin domain family 4, member d, Mpcl, Mcl, mcl, Clec4d, C-type lectin superfamily member 8, mMCL, Macrophage-restricted C-type lectin, C-type lectin domain family 4 member D, Clecsf8

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:- cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:76.40 spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:237.60 peripheral blood:- spleen:- thymus:- bone marrow:153.90 adipose:- bone:37.60 skin:-
GeneChip cerebrum:4.40 cerebellum:4.56 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:4.54 spine:4.37 retina:4.97 eye:5.97 artery/aorta:- vein:4.92 lymphnode:5.37 peripheral blood:- spleen:6.39 thymus:- bone marrow:10 adipose:4.67 bone:9.58 skin:4.63
CAGE cerebrum:0 cerebellum:- brain stem:0 corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:0.32 retina:- eye:- artery/aorta:1.80 vein:- lymphnode:1.94 peripheral blood:- spleen:2.33 thymus:0 bone marrow:- adipose:- bone:2.97 skin:0.77
RNA-seq cerebrum:0.34 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:112.50 adrenal gland:- pancreas:- breast:- salivary:-
GeneChip uterus:4.60 placenta:4.75 prostate:4.72 ovary:4.68 testis:4.51 heart:4.79 muscle:4.53 esophagus:- stomach:4.66 intestine:4.55 colon:- liver/hepato:4.91 lung:6.33 bladder:4.68 kidney:4.49 pituitary:4.58 thyroid/parathyroid:- adrenal gland:4.78 pancreas:5.38 breast:5.17 salivary:6.49
CAGE uterus:0.44 placenta:0.84 prostate:0.20 ovary:0.35 testis:0 heart:- muscle:- esophagus:- stomach:0 intestine:0 colon:0.23     liver/hepato:0.26    lung:2.58 bladder:0.33 kidney:- pituitary:0.29 thyroid/parathyroid:- adrenal gland:1.82 pancreas:0 breast:0.22 salivary:-
RNA-seq uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:0.69 esophagus:- stomach:- intestine:- colon:-     liver/hepato:0        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-

Gene Information

IDs

Refseq ID NM_001163161
Gene ID 17474
Unigene ID Mm.441101
Probe set ID 1420804_s_at  [Mouse430_2]
Ensembl ID ENSMUSG00000030144

Orthologous Gene

Human[1]  NM_080387
Rat[1]  NM_001003707

Chromosomal Region

6F2  [123,212,125  -  123,225,286]

Gene Family (Interpro ID)

IPR001304  C-type lectin
IPR016187  C-type lectin fold
IPR016186  C-type lectin-like

Link to Pubmed  (Pubmed ID)

9660840
10349636
11042159
11076861
11217851
11841491
12466851
12477932
14971047
15368084
16141072
16141073
21677750
23602766
23709686
23911656

Gene Ontology  (GO ID)

Biological Process

GO:0045087  innate immune response

Cellular Component

GO:0016021  integral to membrane
GO:0016020  membrane

Molecular Function

GO:0030246  carbohydrate binding