chemokine (C-C motif) ligand 20

Synonym

Larc, CCL20, exodus-1, chemokine (C-C motif) ligand 20, MIP3A, CC chemokine ST38, Small inducible cytokine A20 precursor, CC chemokine LARC, Ccl20, CKb4, MIP-3A, Beta chemokine exodus-1, Scya20, MIP-3[a], LARC, Liver and activation-regulated chemokine, ST38, Macrophage inflammatory protein 3 alpha, MIP-3-alpha

normal 40 tissues
developmental tissues and primary cells（FANTOM5 CAGE）

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:-

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:-

peripheral blood:-

spleen:-

thymus:79

bone marrow:-

adipose:-

bone:-

skin:-

GeneChip

cerebrum:4.91

cerebellum:4.98

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:4.88

spine:5.08

retina:5.13

eye:5.38

artery/aorta:-

vein:4.92

lymphnode:4.98

peripheral blood:-

spleen:4.95

thymus:-

bone marrow:5.03

adipose:5.07

bone:5.24

skin:5.09

CAGE

cerebrum:0

cerebellum:-

brain stem:0

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:0

retina:-

eye:-

artery/aorta:0

vein:-

lymphnode:2.85

peripheral blood:-

spleen:0

thymus:1.95

bone marrow:-

adipose:-

bone:0

skin:2.05

RNA-seq

nodata

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:-

placenta:-

prostate:-

ovary:-

testis:7.40

heart:-

muscle:-

esophagus:-

stomach:-

intestine:-

colon:-

liver/hepato:-

lung:-

bladder:-

kidney:-

pituitary:-

thyroid/parathyroid:-

adrenal gland:-

pancreas:-

breast:22.90

salivary:-

GeneChip

uterus:4.82

placenta:5.19

prostate:5.06

ovary:4.88

testis:5.22

heart:5.48

muscle:5.04

esophagus:-

stomach:5.37

intestine:6.23

colon:-

liver/hepato:5.20

lung:4.80

bladder:5.05

kidney:5.13

pituitary:5.03

thyroid/parathyroid:-

adrenal gland:4.77

pancreas:5.49

breast:5.28

salivary:5.30

CAGE

uterus:1.32

placenta:0.11

prostate:0

ovary:0

testis:0

heart:-

muscle:-

esophagus:-

stomach:0

intestine:0.95

colon:1.85

liver/hepato:0

lung:0.75

bladder:0

kidney:-

pituitary:0

thyroid/parathyroid:-

adrenal gland:0

pancreas:0

breast:0.22

salivary:-

RNA-seq

nodata

IDs

Refseq ID	NM_001159738
Gene ID	20297
Unigene ID	Mm.116739
Probe set ID	1422029_at [Mouse430_2]
Ensembl ID	ENSMUSG00000026166

Orthologous Gene

Human[2]	NM_001130046, NM_004591
Rat [0]

Chromosomal Region

1C5 [83,113,341 - 83,115,742]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

IPR001811

Small chemokine, interleukin-8-like

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

GO:0042466	chemokinesis
GO:0006935	chemotaxis
GO:0006955	immune response
GO:0006954	inflammatory response

Cellular Component

GO:0005576	extracellular region
GO:0005615	extracellular space

Molecular Function

GO:0008009	chemokine activity
GO:0005125	cytokine activity
GO:0005515	protein binding

chemokine (C-C motif) ligand 20

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function