TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)

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Synonym

D8Ertd812e, Trmt1, 6720477L24, tRNA 2,2-dimethylguanosine-26 methyltransferase, tRNA(m(2,2)G26)dimethyltransferase, tRNA(guanine-26,N(2)-N(2)) methyltransferase, N(2),N(2)-dimethylguanosine tRNA methyltransferase, 6720406L13Rik

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:132 cerebellum:165.80 brain stem:381.40 corpus callosum/glia:- pineal gland:- peripheral nerve:324.80 spine:94.60 retina:32.10 eye:22.80 artery/aorta:168.80 vein:- lymphnode:356.40 peripheral blood:115 spleen:553 thymus:88.90 bone marrow:25.60 adipose:- bone:137.80 skin:142.50
GeneChip cerebrum:8.31 cerebellum:8.03 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:8.13 spine:8.01 retina:7.55 eye:8.09 artery/aorta:- vein:8.10 lymphnode:8.73 peripheral blood:- spleen:8.81 thymus:- bone marrow:7.85 adipose:8.19 bone:7.77 skin:8.25
CAGE cerebrum:3.36 cerebellum:- brain stem:3.35 corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:3.26 retina:- eye:- artery/aorta:2.93 vein:- lymphnode:2.77 peripheral blood:- spleen:3.40 thymus:3.24 bone marrow:- adipose:- bone:2.93 skin:2.82
RNA-seq cerebrum:6.39 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:392.60 placenta:69 prostate:- ovary:80.40 testis:118.20 heart:167.40 muscle:71 esophagus:- stomach:32.70 intestine:- colon:52.90     liver/hepato:99.60        lung:140.60    bladder:264.70 kidney:80.60 pituitary:206.70 thyroid/parathyroid:- adrenal gland:- pancreas:37.50 breast:91.40 salivary:-
GeneChip uterus:8.80 placenta:8.04 prostate:9 ovary:8.76 testis:9.19 heart:7.71 muscle:8.70 esophagus:- stomach:8.47 intestine:8.59 colon:- liver/hepato:8.44 lung:7.69 bladder:8.04 kidney:8.10 pituitary:8.39 thyroid/parathyroid:- adrenal gland:8.88 pancreas:8.79 breast:8.48 salivary:9.18
CAGE uterus:3.61 placenta:3.27 prostate:3.70 ovary:3.60 testis:4.92 heart:- muscle:- esophagus:- stomach:3.13 intestine:2.93 colon:3.29     liver/hepato:3.61    lung:3.02 bladder:3.24 kidney:- pituitary:3.25 thyroid/parathyroid:- adrenal gland:3.55 pancreas:4.06 breast:3.37 salivary:-
RNA-seq uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:7.37 esophagus:- stomach:- intestine:- colon:-     liver/hepato:7.12        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-

Gene Information

IDs

Refseq ID NM_001164559
Gene ID 212528
Unigene ID Mm.275720
Probe set ID 1436494_x_at  [Mouse430_2]
Ensembl ID ENSMUSG00000001909

Orthologous Gene

Human[6]  NM_001136035, NM_001142554, NM_017722
Rat[1]  NM_001013870, NM_001142554, NM_017722

Chromosomal Region

8C3  [87,212,765  -  87,223,707]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

8889548
10349636
10725249
10922068
11042159
11076861
11217851
12466851
12477932
12520002
12904583
14610273
15618518
15782199
16141072
16141073
18799693
21267068

Gene Ontology  (GO ID)

Biological Process

GO:0008150  biological_process
GO:0032259  methylation
GO:0008033  tRNA processing

Cellular Component

GO:0005575  cellular_component

Molecular Function

GO:0046872  metal ion binding
GO:0008168  methyltransferase activity
GO:0003674  molecular_function
GO:0003723  RNA binding
GO:0016740  transferase activity
GO:0004809  tRNA (guanine-N2-)-methyltransferase activity