LysM, putative peptidoglycan-binding, domain containing 1

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Synonym

MGC38837, AI415311, 2610022K04Rik, Lysmd1

normal 40 tissues
developmental tissues and primary cells（FANTOM5 CAGE）

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:15.60

cerebellum:36.80

brain stem:63.60

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:7.60

artery/aorta:-

vein:-

lymphnode:10.80

peripheral blood:86.30

spleen:-

thymus:-

bone marrow:12.80

adipose:-

bone:12.50

skin:15.80

GeneChip

cerebrum:6.58

cerebellum:6.86

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:6.91

spine:7.06

retina:7.18

eye:6.72

artery/aorta:-

vein:6.26

lymphnode:6.17

peripheral blood:-

spleen:6.41

thymus:-

bone marrow:6.59

adipose:6.28

bone:6.23

skin:7.24

CAGE

nodata

RNA-seq

cerebrum:3.65

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:-

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:-

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:-

placenta:-

prostate:-

ovary:23

testis:14.80

heart:-

muscle:-

esophagus:-

stomach:-

intestine:-

colon:17.60

liver/hepato:18.10

lung:10

bladder:66.20

kidney:16.10

pituitary:-

thyroid/parathyroid:-

adrenal gland:-

pancreas:-

breast:-

salivary:-

GeneChip

uterus:6.08

placenta:6.83

prostate:6.29

ovary:6.23

testis:6.70

heart:6.42

muscle:6.70

esophagus:-

stomach:6.46

intestine:6.26

colon:-

liver/hepato:6.85

lung:6.06

bladder:6.03

kidney:6.61

pituitary:6.63

thyroid/parathyroid:-

adrenal gland:5.89

pancreas:6.66

breast:6.31

salivary:6.52

CAGE

nodata

RNA-seq

uterus:-

placenta:-

prostate:-

ovary:-

testis:-

heart:-

muscle:2.15

esophagus:-

stomach:-

intestine:-

colon:-

liver/hepato:1.52

lung:-

bladder:-

kidney:-

pituitary:-

thyroid/parathyroid:-

adrenal gland:-

pancreas:-

breast:-

salivary:-

IDs

Refseq ID	NM_153121
Gene ID	217779
Unigene ID	Mm.341945
Probe set ID	1460438_at [Mouse430_2]
Ensembl ID	ENSMUSG00000053769

Orthologous Gene

Human[2]	NM_001136543, NM_212551
Rat[1]	NM_001024302, NM_212551

Chromosomal Region

12D3 [95,166,150 - 95,166,830]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

3F2.1 [94,938,010 - 94,943,440]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

IPR018392	Peptidoglycan-binding lysin domain
IPR002482	Peptidoglycan-binding Lysin subgroup

Gene Ontology (GO ID)

LysM, putative peptidoglycan-binding, domain containing 1

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function