intraflagellar transport 88 homolog (Chlamydomonas)

Synonym

polaris, Tg737, Ttc10, TgN737Rpw, Tg737Rpw, Intraflagellar transport 88 homolog, flexo, TgN(Imorpk)737Rpw, IFT88, AW552028, Recessive polycystic kidney disease protein Tg737, Ift88, TPR repeat protein 10, Oak Ridge polycystic kidneys, fxo, Tetratricopeptide repeat protein 10, orpk

normal 40 tissues
developmental tissues and primary cells（FANTOM5 CAGE）

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:12.20

cerebellum:92.10

brain stem:63.60

corpus callosum/glia:-

pineal gland:-

peripheral nerve:19.10

spine:47.30

retina:-

eye:22.80

artery/aorta:337.60

vein:-

lymphnode:205.20

peripheral blood:-

spleen:-

thymus:79

bone marrow:12.80

adipose:-

bone:12.50

skin:23.80

GeneChip

cerebrum:7.36

cerebellum:7.22

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:7.40

spine:7.35

retina:7.82

eye:7.78

artery/aorta:-

vein:7.29

lymphnode:6.56

peripheral blood:-

spleen:6.77

thymus:-

bone marrow:6.28

adipose:7.14

bone:6.21

skin:7.08

CAGE

cerebrum:2.93

cerebellum:-

brain stem:2.82

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:2.73

retina:-

eye:-

artery/aorta:2.38

vein:-

lymphnode:2.38

peripheral blood:-

spleen:1.32

thymus:2.49

bone marrow:-

adipose:-

bone:2.09

skin:2.42

RNA-seq

cerebrum:1.58

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:-

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:-

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:43.60

placenta:-

prostate:-

ovary:23

testis:51.70

heart:-

muscle:-

esophagus:-

stomach:32.70

intestine:37

colon:35.20

liver/hepato:-

lung:30.10

bladder:66.20

kidney:8.10

pituitary:25.80

thyroid/parathyroid:-

adrenal gland:-

pancreas:9.40

breast:6.50

salivary:-

GeneChip

uterus:7.40

placenta:7.32

prostate:7.59

ovary:7.50

testis:9.01

heart:7.08

muscle:6.59

esophagus:-

stomach:6.89

intestine:6.90

colon:-

liver/hepato:6.67

lung:7.19

bladder:7.47

kidney:7.67

pituitary:7.80

thyroid/parathyroid:-

adrenal gland:7.54

pancreas:6.66

breast:6.94

salivary:6.88

CAGE

uterus:2.93

placenta:1.96

prostate:2.52

ovary:2.98

testis:4.67

heart:-

muscle:-

esophagus:-

stomach:1.75

intestine:2.38

colon:1.77

liver/hepato:1.64

lung:3.00

bladder:2.58

kidney:-

pituitary:3.02

thyroid/parathyroid:-

adrenal gland:2.62

pancreas:2.66

breast:2.20

salivary:-

RNA-seq

uterus:-

placenta:-

prostate:-

ovary:-

testis:-

heart:-

muscle:2.87

esophagus:-

stomach:-

intestine:-

colon:-

liver/hepato:1.68

lung:-

bladder:-

kidney:-

pituitary:-

thyroid/parathyroid:-

adrenal gland:-

pancreas:-

breast:-

salivary:-

IDs

Refseq ID	NM_009376
Gene ID	21821
Unigene ID	Mm.465324
Probe set ID	1448652_at [Mouse430_2]
Ensembl ID	ENSMUSG00000040040

Orthologous Gene

Human[2]	NM_006531, NM_175605
Rat[1]	NM_001107266, NM_175605

Chromosomal Region

Gene Family (Interpro ID)

IPR019734

Tetratricopeptide repeat

Gene Ontology (GO ID)

Biological Process

GO:0009952	anterior/posterior pattern formation
GO:0007420	brain development
GO:0060411	cardiac septum morphogenesis
GO:0030030	cell projection organization
GO:0060271	cilium morphogenesis
GO:0007368	determination of left/right symmetry
GO:0009953	dorsal/ventral pattern formation
GO:0042733	embryonic digit morphogenesis
GO:0048598	embryonic morphogenesis
GO:0048568	embryonic organ development
GO:0003382	epithelial cell morphogenesis
GO:0001654	eye development
GO:0048853	forebrain morphogenesis
GO:0007507	heart development
GO:0001701	in utero embryonic development
GO:0060173	limb development
GO:0030324	lung development
GO:0060426	lung vasculature development
GO:0007399	nervous system development
GO:0009887	organ morphogenesis
GO:0060021	palate development
GO:0045862	positive regulation of proteolysis
GO:0008104	protein localization
GO:0016485	protein processing
GO:0042487	regulation of odontogenesis of dentine-containing tooth
GO:0007224	smoothened signaling pathway
GO:0021513	spinal cord dorsal/ventral patterning
GO:0021537	telencephalon development

Cellular Component

GO:0045177	apical part of cell
GO:0005930	axoneme
GO:0042995	cell projection
GO:0005814	centriole
GO:0005929	cilium
GO:0035085	cilium axoneme
GO:0005737	cytoplasm
GO:0005856	cytoskeleton
GO:0005932	microtubule basal body
GO:0031512	motile primary cilium
GO:0032391	photoreceptor connecting cilium

Molecular Function

GO:0005515

protein binding

intraflagellar transport 88 homolog (Chlamydomonas)

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function