ROD1 regulator of differentiation 1 (S. pombe)

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Synonym

5830471K22Rik, C86549, MGC11742, AI462022, Regulator of differentiation 1, ROD1 regulator of differentiation 1 (S. pombe), AW107884, Rod1, AA407443

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:26 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:57.30 spine:- retina:32.10 eye:60.80 artery/aorta:84.40 vein:- lymphnode:32.40 peripheral blood:301.90 spleen:276.50 thymus:79 bone marrow:269.30 adipose:- bone:- skin:190
GeneChip cerebrum:7.77 cerebellum:7.09 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:9.19 spine:7.35 retina:7.77 eye:8.91 artery/aorta:- vein:10.19 lymphnode:11.30 peripheral blood:- spleen:11.40 thymus:- bone marrow:11.70 adipose:9.90 bone:11.79 skin:10.91
CAGE cerebrum:3.23 cerebellum:- brain stem:3.00 corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:3.20 retina:- eye:- artery/aorta:4.78 vein:- lymphnode:6.19 peripheral blood:- spleen:5.75 thymus:5.37 bone marrow:- adipose:- bone:5.51 skin:5.28
RNA-seq cerebrum:1.59 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:87.20 placenta:483.30 prostate:30.90 ovary:11.50 testis:7.40 heart:18.60 muscle:- esophagus:- stomach:- intestine:- colon:52.90     liver/hepato:81.50        lung:100.40    bladder:66.20 kidney:112.80 pituitary:- thyroid/parathyroid:112.50 adrenal gland:424.40 pancreas:178.30 breast:101.20 salivary:-
GeneChip uterus:10.61 placenta:11.77 prostate:10.08 ovary:10.46 testis:7.64 heart:8.53 muscle:8.37 esophagus:- stomach:10.50 intestine:11.09 colon:- liver/hepato:9.64 lung:10.12 bladder:10.17 kidney:9.57 pituitary:9.76 thyroid/parathyroid:- adrenal gland:9.48 pancreas:8.74 breast:10.22 salivary:9.13
CAGE uterus:5.13 placenta:5.98 prostate:4.81 ovary:4.95 testis:3.85 heart:- muscle:- esophagus:- stomach:4.66 intestine:5.44 colon:5.55     liver/hepato:4.62    lung:5.09 bladder:4.93 kidney:- pituitary:4.69 thyroid/parathyroid:- adrenal gland:4.66 pancreas:4.60 breast:5.30 salivary:-
RNA-seq uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:1.27 esophagus:- stomach:- intestine:- colon:-     liver/hepato:3.27        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-

Gene Information

IDs

Refseq ID NM_144904
Gene ID 230257
Unigene ID Mm.331640
Probe set ID 1455819_at  [Mouse430_2]
Ensembl ID ENSMUSG00000028382

Orthologous Gene

Human[9]  NM_001163788, NM_001163790, NM_005156
Rat[1]  NM_031346, NM_001163790, NM_005156

Chromosomal Region

-

Gene Family (Interpro ID)

IPR000504  RNA recognition motif, RNP-1

Link to Pubmed  (Pubmed ID)

10349636
10725249
10922068
11042159
11076861
11217851
11724819
12466851
12477932
12520002
14610273
15489334
16033648
16141072
16141073
16602821
18799693
19521500
19538749
21267068
22260730
22922362

Gene Ontology  (GO ID)

Biological Process

GO:0030154  cell differentiation
GO:0043249  erythrocyte maturation
GO:0006397  mRNA processing
GO:0033119  negative regulation of RNA splicing
GO:0045595  regulation of cell differentiation
GO:0008380  RNA splicing

Cellular Component

GO:0005634  nucleus

Molecular Function

GO:0003676  nucleic acid binding
GO:0000166  nucleotide binding
GO:0003723  RNA binding