RNA binding motif protein 47

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Synonym

MGC18900, BC013481, 9530077J19Rik, cDNA sequence BC013481

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:1.70 cerebellum:18.40 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:32.10 eye:- artery/aorta:168.80 vein:- lymphnode:32.40 peripheral blood:- spleen:- thymus:29.60 bone marrow:- adipose:- bone:25 skin:15.80
GeneChip cerebrum:4.89 cerebellum:5.04 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:5.02 spine:4.96 retina:6.84 eye:5.98 artery/aorta:- vein:4.84 lymphnode:5.24 peripheral blood:- spleen:5.10 thymus:- bone marrow:5.31 adipose:7.52 bone:5.21 skin:5.57
CAGE cerebrum:1.82 cerebellum:- brain stem:0.97 corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:1.05 retina:- eye:- artery/aorta:3.95 vein:- lymphnode:3.78 peripheral blood:- spleen:2.90 thymus:1.90 bone marrow:- adipose:- bone:2.66 skin:3.23
RNA-seq cerebrum:0.93 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:41.40 prostate:- ovary:23 testis:- heart:- muscle:- esophagus:- stomach:- intestine:- colon:88.10     liver/hepato:-        lung:50.20    bladder:132.40 kidney:16.10 pituitary:- thyroid/parathyroid:- adrenal gland:424.40 pancreas:9.40 breast:16.30 salivary:-
GeneChip uterus:5.98 placenta:7.96 prostate:8.42 ovary:6.67 testis:6.56 heart:5.17 muscle:5.23 esophagus:- stomach:8.54 intestine:8.96 colon:- liver/hepato:8.26 lung:6.26 bladder:5.98 kidney:8.94 pituitary:5.09 thyroid/parathyroid:- adrenal gland:7.94 pancreas:6.76 breast:7.28 salivary:6.98
CAGE uterus:3.95 placenta:3.79 prostate:4.58 ovary:3.96 testis:2.19 heart:- muscle:- esophagus:- stomach:4.70 intestine:5.62 colon:5.63     liver/hepato:4.48    lung:3.41 bladder:3.92 kidney:- pituitary:2.14 thyroid/parathyroid:- adrenal gland:3.82 pancreas:4.82 breast:5.28 salivary:-
RNA-seq uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:1.32 esophagus:- stomach:- intestine:- colon:-     liver/hepato:4.51        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-

Gene Information

IDs

Refseq ID NM_178446
Gene ID 245945
Unigene ID Mm.400185
Probe set ID 1423411_at  [Mouse430_2]
Ensembl ID ENSMUSG00000070780

Orthologous Gene

Human[2]  NM_001098634, NM_019027
Rat[1]  NM_001005882, NM_019027

Chromosomal Region

5C3.1  [66,407,788  -  66,564,356]

Gene Family (Interpro ID)

IPR000504  RNA recognition motif, RNP-1

Link to Pubmed  (Pubmed ID)

10349636
10922068
11042159
11076861
11217851
12466851
12477932
12520002
12904583
14610273
16033648
16141072
16141073
17967808
18799693
21267068
21677750
23649762
24029230

Gene Ontology  (GO ID)

Biological Process

GO:0008150  biological_process

Cellular Component

GO:0005575  cellular_component
GO:0005634  nucleus

Molecular Function

GO:0003674  molecular_function
GO:0003676  nucleic acid binding
GO:0000166  nucleotide binding
GO:0003723  RNA binding