PHD finger protein 17

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Synonym

D530048A03Rik, Protein Jade-1, AU041499, Jade1, Kiaa1807, mKIAA1807, PHD finger protein 17, Phf17

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:48.60 cerebellum:36.80 brain stem:349.60 corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:47.30 retina:160.70 eye:45.60 artery/aorta:421.90 vein:- lymphnode:43.20 peripheral blood:158.10 spleen:79 thymus:88.90 bone marrow:25.60 adipose:425.40 bone:25 skin:31.70
GeneChip cerebrum:8.04 cerebellum:8.49 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:7.27 spine:7.32 retina:9.37 eye:9.07 artery/aorta:- vein:8.68 lymphnode:8.60 peripheral blood:- spleen:8.27 thymus:- bone marrow:8.68 adipose:9.05 bone:8.73 skin:8.58
CAGE cerebrum:2.52 cerebellum:- brain stem:2.40 corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:1.94 retina:- eye:- artery/aorta:2.78 vein:- lymphnode:2.17 peripheral blood:- spleen:1.97 thymus:2.64 bone marrow:- adipose:- bone:1.84 skin:2.46
RNA-seq cerebrum:3.56 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:43.60 placenta:303.80 prostate:- ovary:57.50 testis:266 heart:74.40 muscle:142 esophagus:- stomach:98.20 intestine:37 colon:-     liver/hepato:18.10        lung:40.20    bladder:66.20 kidney:32.20 pituitary:77.50 thyroid/parathyroid:- adrenal gland:424.40 pancreas:150.10 breast:68.60 salivary:162
GeneChip uterus:8.06 placenta:10.85 prostate:9.64 ovary:8.92 testis:7.58 heart:8.96 muscle:9.11 esophagus:- stomach:8.38 intestine:8.53 colon:- liver/hepato:8.73 lung:8.47 bladder:8.91 kidney:8.89 pituitary:8.89 thyroid/parathyroid:- adrenal gland:9.84 pancreas:9.10 breast:9.04 salivary:10.11
CAGE uterus:2.22 placenta:4.85 prostate:2.47 ovary:2.30 testis:1.97 heart:- muscle:- esophagus:- stomach:1.75 intestine:2.06 colon:2.24     liver/hepato:2.16    lung:2.54 bladder:2.59 kidney:- pituitary:2.14 thyroid/parathyroid:- adrenal gland:2.81 pancreas:3.10 breast:2.73 salivary:-
RNA-seq uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:1.81 esophagus:- stomach:- intestine:- colon:-     liver/hepato:2.39        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-

Gene Information

IDs

Refseq ID NM_001130185
Gene ID 269424
Unigene ID Mm.286285
Probe set ID 1426752_at  [Mouse430_2]
Ensembl ID ENSMUSG00000025764

Orthologous Gene

Human[2]  NM_024900, NM_199320
Rat[1]  NM_001107670, NM_199320

Chromosomal Region

3B  [41,359,656  -  41,420,784]

Gene Family (Interpro ID)

IPR019787  Zinc finger, PHD-finger
IPR001965  Zinc finger, PHD-type

Link to Pubmed  (Pubmed ID)

8889548
10349636
10725249
10922068
11042159
11076861
11217851
11544199
12169691
12466851
12477932
12520002
12904583
14610273
14612400
14621295
15142957
15489334
15618518
15741177
15782199
16141072
16141073
17967808
18287559
18799693
20059953
20211142
20362542
20412781
21677750
23001567
24097061

Gene Ontology  (GO ID)

Biological Process

GO:0006915  apoptosis
GO:0043966  histone H3 acetylation
GO:0043983  histone H4-K12 acetylation
GO:0043981  histone H4-K5 acetylation
GO:0043982  histone H4-K8 acetylation
GO:0006355  regulation of transcription, DNA-dependent
GO:0006351  transcription, DNA-dependent

Cellular Component

GO:0005737  cytoplasm
GO:0000123  histone acetyltransferase complex
GO:0005739  mitochondrion
GO:0005634  nucleus

Molecular Function

GO:0046872  metal ion binding
GO:0003674  molecular_function
GO:0008270  zinc ion binding