tropomyosin 4

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Synonym

Tropomyosin alpha-4 chain, Tropomyosin-4, Tpm4, tropomyosin 4

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:59 cerebellum:18.40 brain stem:31.80 corpus callosum/glia:- pineal gland:257.80 peripheral nerve:19.10 spine:- retina:32.10 eye:106.40 artery/aorta:- vein:- lymphnode:32.40 peripheral blood:57.50 spleen:79 thymus:29.60 bone marrow:192.30 adipose:- bone:112.70 skin:63.30
GeneChip cerebrum:8.47 cerebellum:8.83 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:10.42 spine:9.02 retina:8.20 eye:10.23 artery/aorta:- vein:12.91 lymphnode:11.71 peripheral blood:- spleen:11.71 thymus:- bone marrow:12.07 adipose:10.61 bone:12.15 skin:11.67
CAGE cerebrum:2.78 cerebellum:- brain stem:3.05 corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:2.99 retina:- eye:- artery/aorta:4.94 vein:- lymphnode:5.64 peripheral blood:- spleen:4.82 thymus:4.04 bone marrow:- adipose:- bone:5.35 skin:5.78
RNA-seq cerebrum:4.75 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:130.90 placenta:96.70 prostate:92.60 ovary:11.50 testis:51.70 heart:74.40 muscle:71 esophagus:- stomach:- intestine:37 colon:52.90     liver/hepato:-        lung:210.90    bladder:- kidney:32.20 pituitary:38.80 thyroid/parathyroid:224.90 adrenal gland:- pancreas:37.50 breast:215.50 salivary:-
GeneChip uterus:11.78 placenta:12.60 prostate:10.07 ovary:11.97 testis:7.09 heart:11.16 muscle:10.35 esophagus:- stomach:11.16 intestine:10.75 colon:- liver/hepato:9.01 lung:12.61 bladder:11.25 kidney:10 pituitary:10.92 thyroid/parathyroid:- adrenal gland:11.06 pancreas:9.25 breast:11.10 salivary:10.65
CAGE uterus:5.29 placenta:6.13 prostate:3.74 ovary:5.33 testis:2.51 heart:- muscle:- esophagus:- stomach:5.60 intestine:4.59 colon:4.09     liver/hepato:3.55    lung:5.63 bladder:4.79 kidney:- pituitary:4.26 thyroid/parathyroid:- adrenal gland:4.74 pancreas:3.68 breast:4.46 salivary:-
RNA-seq uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:79.57 esophagus:- stomach:- intestine:- colon:-     liver/hepato:3.49        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-

Gene Information

IDs

Refseq ID NM_001001491
Gene ID 326618
Unigene ID Mm.295124
Probe set ID 1433883_at  [Mouse430_2]
Ensembl ID ENSMUSG00000031799

Orthologous Gene

Human[4]  NM_001145160, NM_003290
Rat [0]  

Chromosomal Region

-

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

8889548
10349636
10922068
11042159
11076861
11217851
12466851
12477932
14610273
15489334
15782199
16141072
16141073
16236705
16765662
17968984
18036591
18270576
18799693
19118250
21677750
24457600
24614889

Gene Ontology  (GO ID)

Cellular Component

GO:0030863  cortical cytoskeleton
GO:0005737  cytoplasm
GO:0005856  cytoskeleton
GO:0031941  filamentous actin
GO:0002102  podosome
GO:0001725  stress fiber

Molecular Function

GO:0003779  actin binding
GO:0046872  metal ion binding
GO:0003674  molecular_function