synaptoporin

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Synonym

Synpr, synaptoporin, Synaptoporin, 1500003F20Rik, SPO

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:218.80 cerebellum:1510.50 brain stem:858 corpus callosum/glia:- pineal gland:- peripheral nerve:19.10 spine:472.90 retina:546.40 eye:152 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:13.20 thymus:49.40 bone marrow:- adipose:- bone:- skin:7.90
GeneChip cerebrum:9.81 cerebellum:8.12 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:10.35 spine:6.95 retina:8.25 eye:6.74 artery/aorta:- vein:4.56 lymphnode:3.95 peripheral blood:- spleen:4.24 thymus:- bone marrow:4.26 adipose:4.33 bone:4.38 skin:4.54
CAGE cerebrum:4.76 cerebellum:- brain stem:3.72 corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:3.49 retina:- eye:- artery/aorta:0.95 vein:- lymphnode:0 peripheral blood:- spleen:0 thymus:0.49 bone marrow:- adipose:- bone:0 skin:0.40
RNA-seq cerebrum:9.30 cerebellum:9.30 brain stem:9.30 corpus callosum/glia:9.30 pineal gland:9.30 peripheral nerve:9.30 spine:9.30 retina:9.30 eye:9.30 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:- ovary:11.50 testis:- heart:- muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:424.40 pancreas:9.40 breast:- salivary:-
GeneChip uterus:4.25 placenta:4.26 prostate:4.59 ovary:4.41 testis:4.22 heart:4.34 muscle:4.14 esophagus:- stomach:4.22 intestine:4.28 colon:- liver/hepato:4.27 lung:3.90 bladder:4.23 kidney:4.11 pituitary:7.07 thyroid/parathyroid:- adrenal gland:6.83 pancreas:4.57 breast:4.36 salivary:4.38
CAGE uterus:1.32 placenta:0.19 prostate:1.09 ovary:0.62 testis:0.75 heart:- muscle:- esophagus:- stomach:0 intestine:0 colon:0.23     liver/hepato:0    lung:0.17 bladder:0.86 kidney:- pituitary:3.93 thyroid/parathyroid:- adrenal gland:3.34 pancreas:0.84 breast:0.32 salivary:-
RNA-seq uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-

Gene Information

IDs

Refseq ID NM_001163032
Gene ID 72003
Unigene ID Mm.317515
Probe set ID 1423640_at  [Mouse430_2]
Ensembl ID ENSMUSG00000056296

Orthologous Gene

Human[2]  NM_001130003, NM_144642
Rat[1]  NM_023974, NM_144642

Chromosomal Region

14A1  [14,117,294  -  14,447,973]

Gene Family (Interpro ID)

IPR008253  Marvel
IPR021128  MARVEL-like domain
IPR001285  Synaptophysin/synaptoporin

Link to Pubmed  (Pubmed ID)

10349636
11042159
11076861
11217851
12271488
12466851
12477932
15489334
16141072
16141073
19723784
19924828
21267068
21677750

Gene Ontology  (GO ID)

Biological Process

GO:0006810  transport

Cellular Component

GO:0030054  cell junction
GO:0031410  cytoplasmic vesicle
GO:0016021  integral to membrane
GO:0030285  integral to synaptic vesicle membrane
GO:0016020  membrane
GO:0043005  neuron projection
GO:0045202  synapse
GO:0008021  synaptic vesicle

Molecular Function

GO:0005215  transporter activity