TATA box binding protein (Tbp)-associated factor, RNA polymerase I, D

 jump to detail

Synonym

4930553M18Rik, Josd3, Protein JOSD3, MGC117821, 5930426I11Rik, 2810003M17Rik, Josephin domain containing 3

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:39.90 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:57.30 spine:- retina:- eye:30.40 artery/aorta:- vein:- lymphnode:97.20 peripheral blood:- spleen:65.80 thymus:49.40 bone marrow:12.80 adipose:- bone:12.50 skin:55.40
GeneChip cerebrum:5.79 cerebellum:5.19 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:6.17 spine:5.57 retina:5.57 eye:6.42 artery/aorta:- vein:6.85 lymphnode:6.88 peripheral blood:- spleen:6.23 thymus:- bone marrow:7.19 adipose:5.86 bone:6.72 skin:6.16
CAGE cerebrum:3.21 cerebellum:- brain stem:2.90 corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:2.79 retina:- eye:- artery/aorta:3.40 vein:- lymphnode:4.27 peripheral blood:- spleen:3.46 thymus:3.58 bone marrow:- adipose:- bone:2.93 skin:3.68
RNA-seq cerebrum:15.01 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:174.50 placenta:13.80 prostate:61.80 ovary:46 testis:133 heart:37.20 muscle:- esophagus:- stomach:- intestine:221.80 colon:52.90     liver/hepato:45.30        lung:10    bladder:- kidney:8.10 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:140.70 breast:84.90 salivary:-
GeneChip uterus:6.19 placenta:6.09 prostate:5.90 ovary:6.53 testis:6.25 heart:5.86 muscle:5.41 esophagus:- stomach:5.78 intestine:6.52 colon:- liver/hepato:5.64 lung:5.27 bladder:6.23 kidney:5.56 pituitary:5.62 thyroid/parathyroid:- adrenal gland:5.87 pancreas:6.02 breast:6.31 salivary:6.63
CAGE uterus:3.39 placenta:3.12 prostate:2.80 ovary:3.61 testis:3.81 heart:- muscle:- esophagus:- stomach:3.36 intestine:3.50 colon:3.31     liver/hepato:3.04    lung:2.98 bladder:3.29 kidney:- pituitary:3.17 thyroid/parathyroid:- adrenal gland:3.26 pancreas:3.57 breast:4.13 salivary:-
RNA-seq uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:44.73 esophagus:- stomach:- intestine:- colon:-     liver/hepato:5.59        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-

Gene Information

IDs

Refseq ID NM_027261
Gene ID 75316
Unigene ID Mm.354115
Probe set ID 1452635_x_at  [Mouse430_2]
Ensembl ID ENSMUSG00000031939

Orthologous Gene

Human[2]  NM_024116
Rat[1]  NM_001014207

Chromosomal Region

9A2  [15,110,658  -  15,121,441]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

10349636
10725249
10922068
11042159
11076861
11217851
12466851
12477932
12520002
12904583
14610273
14681479
15489334
16141072
16141073
17967808
18799693

Gene Ontology  (GO ID)

Biological Process

GO:0008150  biological_process
GO:0006355  regulation of transcription, DNA-dependent
GO:0006351  transcription, DNA-dependent

Cellular Component

GO:0005575  cellular_component
GO:0005634  nucleus

Molecular Function

GO:0003677  DNA binding
GO:0003674  molecular_function