splicing factor 3b, subunit 1

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Synonym

Pre-mRNA-splicing factor SF3b 155 kDa subunit, Splicing factor 3B subunit 1, 2810001M05Rik, Sf3b1, Spliceosome-associated protein 155, TA-8, SAP 155, Prp10, Sap155, Targ4, SF3b155, SAP155, AA409119, splicing factor 3b, subunit 1, 155kDa

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:151.10 cerebellum:294.70 brain stem:95.30 corpus callosum/glia:- pineal gland:- peripheral nerve:248.40 spine:236.40 retina:257.20 eye:288.70 artery/aorta:- vein:- lymphnode:86.40 peripheral blood:431.30 spleen:210.70 thymus:405.10 bone marrow:89.80 adipose:- bone:238 skin:182.10
GeneChip cerebrum:10.76 cerebellum:11.07 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:10.36 spine:10.15 retina:10.42 eye:10.38 artery/aorta:- vein:11.09 lymphnode:12.03 peripheral blood:- spleen:11.96 thymus:- bone marrow:11.63 adipose:10.60 bone:11.74 skin:11.22
CAGE cerebrum:4.79 cerebellum:- brain stem:4.47 corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:4.38 retina:- eye:- artery/aorta:4.79 vein:- lymphnode:5.81 peripheral blood:- spleen:4.84 thymus:4.83 bone marrow:- adipose:- bone:4.50 skin:4.87
RNA-seq cerebrum:6.45 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:305.40 placenta:82.80 prostate:247.10 ovary:264.30 testis:177.40 heart:279 muscle:142 esophagus:- stomach:196.40 intestine:- colon:35.20     liver/hepato:81.50        lung:311.30    bladder:264.70 kidney:104.80 pituitary:348.80 thyroid/parathyroid:- adrenal gland:- pancreas:281.50 breast:342.80 salivary:54
GeneChip uterus:11.55 placenta:10.93 prostate:11.22 ovary:11.36 testis:10.69 heart:10.45 muscle:10.36 esophagus:- stomach:10.76 intestine:11.24 colon:- liver/hepato:10.12 lung:10.95 bladder:10.99 kidney:10.50 pituitary:11.39 thyroid/parathyroid:- adrenal gland:11.72 pancreas:10.29 breast:11.04 salivary:11.09
CAGE uterus:4.83 placenta:4.55 prostate:4.59 ovary:4.71 testis:4.76 heart:- muscle:- esophagus:- stomach:4.14 intestine:4.42 colon:4.63     liver/hepato:4.19    lung:4.83 bladder:4.82 kidney:- pituitary:4.96 thyroid/parathyroid:- adrenal gland:4.61 pancreas:4.56 breast:4.72 salivary:-
RNA-seq uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:6.37 esophagus:- stomach:- intestine:- colon:-     liver/hepato:10.70        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-

Gene Information

IDs

Refseq ID NM_031179
Gene ID 81898
Unigene ID Mm.279736
Probe set ID 1449138_at  [Mouse430_2]
Ensembl ID ENSMUSG00000025982

Orthologous Gene

Human[5]  NM_001005526, NM_012433
Rat[1]  NM_053426, NM_012433

Chromosomal Region

-

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

7654366
8889548
10349636
10922068
11042159
11076861
11217851
11252167
12466305
12466851
12477932
12520002
14610273
14729942
15741318
16033648
16141072
16141073
18559850
18799693
20153721
21267068
21553260
22826563
22937132
23086144
23665500
24457600

Gene Ontology  (GO ID)

Biological Process

GO:0009952  anterior/posterior pattern formation
GO:0006397  mRNA processing
GO:0000398  nuclear mRNA splicing, via spliceosome
GO:0008380  RNA splicing
GO:0000375  RNA splicing, via transesterification reactions

Cellular Component

GO:0071013  catalytic step 2 spliceosome
GO:0005634  nucleus
GO:0005681  spliceosomal complex
GO:0005689  U12-type spliceosomal complex

Molecular Function

GO:0003682  chromatin binding
GO:0005515  protein binding