neurofascin

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Synonym

-

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:59.80 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:36.90 spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
GeneChip cerebrum:5.98 cerebellum:5.95 brain stem:6.07 corpus callosum/glia:- pineal gland:- peripheral nerve:5.53 spine:- retina:- eye:6 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:5.70 thymus:5.56 bone marrow:5.88 adipose:- bone:- skin:-
CAGE nodata
RNA-seq nodata
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:-    bladder:- kidney:- pituitary:59.20 thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip uterus:- placenta:- prostate:- ovary:- testis:- heart:5.78 muscle:5.88 esophagus:- stomach:- intestine:5.69 colon:5.51 liver/hepato:- lung:- bladder:- kidney:5.87 pituitary:5.75 thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
CAGE nodata
RNA-seq nodata

Gene Information

IDs

Refseq ID NM_001160313
Gene ID 116690
Unigene ID Rn.3048
Probe set ID U81035_s_at  [RG_U34A]
Ensembl ID ENSRNOG00000030515

Orthologous Gene

Human[6]  NM_001005388, NM_001005389, NM_001160331, NM_001160332, NM_001160333, NM_015090
Mouse[4]  NM_001160316, NM_001160317, NM_001160318, NM_182716, NM_001160333, NM_015090

Chromosomal Region

13q13  [45,456,189  -  45,529,109]

Gene Family (Interpro ID)

IPR003961  Fibronectin, type III
IPR008957  Fibronectin, type III-like fold
IPR013106  Immunoglobulin V-set
IPR003596  Immunoglobulin V-set, subgroup
IPR009134  Tyrosine-protein kinase, vascular endothelial growth factor receptor (VEGFR), N-terminal

Link to Pubmed  (Pubmed ID)

7961622
8458865
8889548
8947556
9151675
9562181
10931875
11152476
11470829
11724816
11839274
12223548
15691718
15797713
16039564
16525039
16566914
16652168
17045809
17234591
17709431
17846150
17936266
19666467
21576239
23971736

Gene Ontology  (GO ID)

Biological Process

GO:0007411  axon guidance
GO:0007155  cell adhesion
GO:0045162  clustering of voltage-gated sodium channels
GO:0042552  myelination
GO:0030913  paranodal junction assembly
GO:0007422  peripheral nervous system development
GO:0071205  protein localization to juxtaparanode region of axon
GO:0050808  synapse organization
GO:0019226  transmission of nerve impulse

Cellular Component

GO:0030424  axon
GO:0043194  initial segment
GO:0016021  integral to membrane
GO:0005622  intracellular
GO:0033268  node of Ranvier
GO:0033010  paranodal junction
GO:0033270  paranode region of axon
GO:0005886  plasma membrane

Molecular Function

GO:0019904  protein domain specific binding