Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)

 jump to detail

Synonym

-

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:119.60 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:73.70 spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
GeneChip cerebrum:7.08 cerebellum:6.67 brain stem:6.72 corpus callosum/glia:- pineal gland:- peripheral nerve:7.50 spine:- retina:- eye:6.86 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:6.79 thymus:6.81 bone marrow:6.97 adipose:- bone:- skin:-
CAGE nodata
RNA-seq nodata
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:79.60 prostate:- ovary:- testis:741.10 heart:96.90 muscle:- esophagus:- stomach:- intestine:- colon:289.90     liver/hepato:-        lung:50.70    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip uterus:- placenta:- prostate:- ovary:- testis:- heart:6.83 muscle:6.86 esophagus:- stomach:- intestine:6.65 colon:6.83 liver/hepato:- lung:- bladder:- kidney:6.64 pituitary:7.35 thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
CAGE nodata
RNA-seq nodata

Gene Information

IDs

Refseq ID NM_001105808
Gene ID 287522
Unigene ID Rn.19451
Probe set ID rc_AA800800_at  [RG_U34A]
Ensembl ID ENSRNOG00000003041

Orthologous Gene

Human[1]  NM_001170957, NM_017575
Mouse[1]  NM_001002764, NM_017575

Chromosomal Region

10q24  [62,234,450  -  62,470,611]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

Gene Ontology  (GO ID)

Biological Process

GO:0000184  nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000723  telomere maintenance

Cellular Component

GO:0005737  cytoplasm
GO:0005829  cytosol
GO:0005730  nucleolus
GO:0005634  nucleus

Molecular Function

GO:0004521  endoribonuclease activity
GO:0042162  telomeric DNA binding