hippocalcin

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Synonym

-

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:23.90 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:73.70 spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
GeneChip cerebrum:9.36 cerebellum:8.28 brain stem:8.15 corpus callosum/glia:- pineal gland:- peripheral nerve:10.77 spine:- retina:- eye:8.14 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:7.51 thymus:7.65 bone marrow:7.69 adipose:- bone:- skin:-
CAGE nodata
RNA-seq nodata
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:- ovary:- testis:- heart:19.40 muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip uterus:- placenta:- prostate:- ovary:- testis:- heart:7.55 muscle:7.80 esophagus:- stomach:- intestine:7.44 colon:7.49 liver/hepato:- lung:- bladder:- kidney:7.74 pituitary:7.99 thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
CAGE nodata
RNA-seq nodata

Gene Information

IDs

Refseq ID NM_017122
Gene ID 29177
Unigene ID Rn.110195
Probe set ID D12573_at  [RG_U34A]
Ensembl ID ENSRNOG00000006979

Orthologous Gene

Human[1]  NM_002143
Mouse[4]  NM_001130419, NM_010471

Chromosomal Region

5q36  [148,268,062  -  148,276,223]

Gene Family (Interpro ID)

IPR002048  Calcium-binding EF-hand
IPR018249  EF-HAND 2
IPR018248  EF-Hand domain
IPR001125  Recoverin

Link to Pubmed  (Pubmed ID)

1280427
1543495
8166736
8240319
8360179
8938744
12477932
12657681
15336960
15489334
16102532
16294323
16470652
20704590
22639951
23142228

Gene Ontology  (GO ID)

Biological Process

GO:0048839  inner ear development

Molecular Function

GO:0003779  actin binding
GO:0005509  calcium ion binding
GO:0005515  protein binding