GATA binding protein 6

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Synonym

-

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:- cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
GeneChip cerebrum:7.63 cerebellum:7.67 brain stem:7.68 corpus callosum/glia:- pineal gland:- peripheral nerve:7.72 spine:- retina:- eye:7.76 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:8.10 thymus:7.63 bone marrow:8.45 adipose:- bone:- skin:-
CAGE nodata
RNA-seq nodata
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:75.90 ovary:- testis:- heart:310.20 muscle:- esophagus:- stomach:- intestine:104.70 colon:-     liver/hepato:-        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip uterus:- placenta:- prostate:- ovary:- testis:- heart:8.14 muscle:7.78 esophagus:- stomach:- intestine:7.62 colon:7.51 liver/hepato:- lung:- bladder:- kidney:7.72 pituitary:7.66 thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
CAGE nodata
RNA-seq nodata

Gene Information

IDs

Refseq ID NM_019185
Gene ID 29300
Unigene ID Rn.8701
Probe set ID rc_AA955182_g_at  [RG_U34A]
Ensembl ID ENSRNOG00000023433

Orthologous Gene

Human[1]  NM_005257
Mouse[2]  NM_010258

Chromosomal Region

18p13  [2,503,945  -  2,534,251]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

8083222
8183957
8248184
9188781
10330176
10851229
12530967
12606287
15060019
15591218
17923110
18303859
18768929
19628789
19842842
22695114

Gene Ontology  (GO ID)

Biological Process

GO:0055007  cardiac muscle cell differentiation
GO:0014898  cardiac muscle hypertrophy in response to stress
GO:0048738  cardiac muscle tissue development
GO:0060947  cardiac vascular smooth muscle cell differentiation
GO:0071371  cellular response to gonadotropin stimulus
GO:0071456  cellular response to hypoxia
GO:0060486  Clara cell differentiation
GO:0007493  endodermal cell fate determination
GO:0030855  epithelial cell differentiation
GO:0001701  in utero embryonic development
GO:0060575  intestinal epithelial cell differentiation
GO:0001889  liver development
GO:0060430  lung saccule development
GO:0008584  male gonad development
GO:0043066  negative regulation of apoptosis
GO:0000122  negative regulation of transcription from RNA polymerase II promoter
GO:0045892  negative regulation of transcription, DNA-dependent
GO:0032911  negative regulation of transforming growth factor-beta1 production
GO:0032912  negative regulation of transforming growth factor-beta2 production
GO:0042475  odontogenesis of dentine-containing tooth
GO:0048645  organ formation
GO:0003148  outflow tract septum morphogenesis
GO:0031016  pancreas development
GO:0003310  pancreatic A cell differentiation
GO:0003309  pancreatic B cell differentiation
GO:0006644  phospholipid metabolic process
GO:0045766  positive regulation of angiogenesis
GO:0043065  positive regulation of apoptosis
GO:0030513  positive regulation of BMP signaling pathway
GO:0060045  positive regulation of cardiac muscle cell proliferation
GO:0071158  positive regulation of cell cycle arrest
GO:0045944  positive regulation of transcription from RNA polymerase II promoter
GO:0045893  positive regulation of transcription, DNA-dependent
GO:0010468  regulation of gene expression
GO:0006355  regulation of transcription, DNA-dependent
GO:0051591  response to cAMP
GO:0042493  response to drug
GO:0043627  response to estrogen stimulus
GO:0070848  response to growth factor stimulus
GO:0009636  response to toxin
GO:0051145  smooth muscle cell differentiation
GO:0006366  transcription from RNA polymerase II promoter
GO:0006351  transcription, DNA-dependent
GO:0035239  tube morphogenesis
GO:0060510  Type II pneumocyte differentiation

Cellular Component

GO:0005634  nucleus
GO:0005667  transcription factor complex

Molecular Function

GO:0003682  chromatin binding
GO:0003677  DNA binding
GO:0044212  DNA regulatory region binding
GO:0003690  double-stranded DNA binding
GO:0019901  protein kinase binding
GO:0003705  RNA polymerase II transcription factor activity, enhancer binding
GO:0043565  sequence-specific DNA binding
GO:0003700  transcription factor activity
GO:0008134  transcription factor binding
GO:0008270  zinc ion binding