CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1

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Synonym

-

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:47.90 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:106.60 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:156 thymus:491.60 bone marrow:- adipose:- bone:78.10 skin:-
GeneChip cerebrum:7.33 cerebellum:7.75 brain stem:7.27 corpus callosum/glia:- pineal gland:- peripheral nerve:7.31 spine:- retina:- eye:7.67 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:8.84 thymus:9.03 bone marrow:8.62 adipose:- bone:- skin:-
CAGE nodata
RNA-seq nodata
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:79.60 prostate:189.80 ovary:- testis:- heart:193.90 muscle:797.20 esophagus:- stomach:- intestine:418.70 colon:289.90     liver/hepato:66.50        lung:202.60    bladder:- kidney:127.60 pituitary:59.20 thyroid/parathyroid:- adrenal gland:- pancreas:56.90 breast:- salivary:-
GeneChip uterus:- placenta:- prostate:- ovary:- testis:- heart:8.57 muscle:8.71 esophagus:- stomach:- intestine:9.12 colon:9.28 liver/hepato:- lung:- bladder:- kidney:9.58 pituitary:7.70 thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
CAGE nodata
RNA-seq nodata

Gene Information

IDs

Refseq ID NM_001128079
Gene ID 363249
Unigene ID Rn.163070
Probe set ID rc_AI011556_s_at  [RG_U34A]
Ensembl ID ENSRNOG00000015295

Orthologous Gene

Human[4]  NM_001206878, NM_001206879, NM_021198, NM_182642
Mouse[1]  NM_153088, NM_001206879, NM_021198, NM_182642

Chromosomal Region

9q33  [73,731,542  -  73,736,762]

Gene Family (Interpro ID)

IPR011948  Dullard-like phosphatase domain
IPR004274  NLI interacting factor

Link to Pubmed  (Pubmed ID)

12477932

Gene Ontology  (GO ID)

Biological Process

GO:0050768  negative regulation of neurogenesis
GO:0045665  negative regulation of neuron differentiation
GO:0006470  protein amino acid dephosphorylation
GO:0006357  regulation of transcription from RNA polymerase II promoter

Cellular Component

GO:0005634  nucleus

Molecular Function

GO:0008420  CTD phosphatase activity