calsequestrin 1 (fast-twitch, skeletal muscle)

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Synonym

-

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:35.90 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:36.90 spine:- retina:- eye:71.10 artery/aorta:357.10 vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:294.40 bone:- skin:-
GeneChip cerebrum:7.48 cerebellum:7.30 brain stem:7.29 corpus callosum/glia:- pineal gland:- peripheral nerve:7.19 spine:- retina:- eye:7.64 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:7 thymus:6.92 bone marrow:7.07 adipose:- bone:- skin:-
CAGE nodata
RNA-seq nodata
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:38 ovary:- testis:- heart:174.50 muscle:1860.20 esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip uterus:- placenta:- prostate:- ovary:- testis:- heart:7.81 muscle:12.25 esophagus:- stomach:- intestine:7.16 colon:7.03 liver/hepato:- lung:- bladder:- kidney:7.40 pituitary:7.36 thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
CAGE nodata
RNA-seq nodata

Gene Information

IDs

Refseq ID NM_001159594
Gene ID 686019
Unigene ID Rn.159963
Probe set ID rc_AI639422_at  [RG_U34A]
Ensembl ID ENSRNOG00000006930

Orthologous Gene

Human[1]  NM_001231
Mouse[1]  NM_009813

Chromosomal Region

13q24  [88,200,977  -  88,210,284]

Gene Family (Interpro ID)

IPR012336  Thioredoxin-like fold

Link to Pubmed  (Pubmed ID)

149586
3417768
6355123
8042990
8600158
8889548
11010809
11546666
11976916
14506614
15057822
15138610
15489334
15561962
15561963
15684334
17681849
18269685
19029185
19423840
20356453

Gene Ontology  (GO ID)

Biological Process

GO:0007029  endoplasmic reticulum organization
GO:0010880  regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum
GO:0051282  regulation of sequestering of calcium ion
GO:0014809  regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion
GO:0014894  response to denervation involved in regulation of muscle adaptation
GO:0009408  response to heat
GO:0010033  response to organic substance
GO:0006950  response to stress
GO:0007519  skeletal muscle tissue development

Cellular Component

GO:0005737  cytoplasm
GO:0005794  Golgi apparatus
GO:0031674  I band
GO:0043231  intracellular membrane-bounded organelle
GO:0005739  mitochondrion
GO:0030016  myofibril
GO:0042383  sarcolemma
GO:0016529  sarcoplasmic reticulum
GO:0033018  sarcoplasmic reticulum lumen
GO:0030315  T-tubule
GO:0014802  terminal cisterna
GO:0014804  terminal cisterna lumen

Molecular Function

GO:0005509  calcium ion binding
GO:0003674  molecular_function